RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 TEX11Q8IYF3 940 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 SH3RF3Q8TEJ3 882 aaPredicted RBP14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 SOCS4Q8WXH5 440 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 USP6NLQ92738 828 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 PORCNQ9H237 461 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 DNAJC18Q9H819 358 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 RBPJLQ9UBG7 517 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 NOB1Q9ULX3 412 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 AKAP2Q9Y2D5 859 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 FRMPD3Q5JV73 1810 aa14.03□□□□□ -0.16
CTNNA1-205ENST00000517904 CDK5RAP2Q96SN8 1893 aa14.02□□□□□ -0.16
CTNNA1-205ENST00000517904 LDHCP07864 332 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 GSTO1P78417 241 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 Q3C1V9 767 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 CDCA7LQ96GN5 454 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 NEUROD6Q96NK8 337 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 COL25A1Q9BXS0 654 aaPredicted RBP14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 RAI14Q9P0K7 980 aa14.02□□□□□ -0.17
CTNNA1-205ENST00000517904 SRGAP3O43295 1099 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 ASNSP08243 561 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 MCAMP43121 646 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 ERVK-9P63128 1117 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 ERVK-24P63145 666 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 MORN1Q5T089 497 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 GUCD1Q96NT3 240 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 PI4KBQ9UBF8 816 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 MAST2Q6P0Q8 1798 aa14.01□□□□□ -0.17
CTNNA1-205ENST00000517904 FOCADQ5VW36 1801 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 USP17L10C9JJH3 530 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 POTEB2H3BUK9 544 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 GDF11O95390 407 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 MAPK4P31152 587 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 MTX1Q13505 466 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 PDE3AQ14432 1141 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 TRMT44Q8IYL2 757 aaKnown RBP14□□□□□ -0.17
CTNNA1-205ENST00000517904 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
CTNNA1-205ENST00000517904 HDAC5Q9UQL6 1122 aa14□□□□□ -0.17
CTNNA1-205ENST00000517904 FLT1P17948 1338 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 C19orf81C9J6K1 198 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 RGS2P41220 211 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 PLEKHH3Q7Z736 793 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 ADGRA1Q86SQ6 560 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 METTL16Q86W50 562 aaKnown RBP13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 MAPKAPK5Q8IW41 473 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 APBA2Q99767 749 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 PAGR1Q9BTK6 254 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 API5Q9BZZ5 524 aaKnown RBP13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 DHX36Q9H2U1 1008 aaKnown RBP13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 EMILIN3Q9NT22 766 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 LRP2BPQ9P2M1 347 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 ZBTB21Q9ULJ3 1066 aa13.99□□□□□ -0.17
CTNNA1-205ENST00000517904 GORABQ5T7V8 394 aa13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 TGFBRAP1Q8WUH2 860 aa13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 FAM161BQ96MY7 647 aa13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 FLRT1Q9NZU1 646 aa13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
CTNNA1-205ENST00000517904 MYO5AQ9Y4I1 1855 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 CNMDO75829 334 aa13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 FAM109BQ6ICB4 259 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 FOXP4Q8IVH2 680 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 CCAR1Q8IX12 1150 aaKnown RBP13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 SNRKQ9NRH2 765 aa13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 NDUFB9Q9Y6M9 179 aa13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 LTBP2Q14767 1821 aa13.97□□□□□ -0.17
CTNNA1-205ENST00000517904 BAG3O95817 575 aa13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 PPP4CP60510 307 aa13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 MAP2K5Q13163 448 aa13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 NAA16Q6N069 864 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 CRACR2BQ8N4Y2 399 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 GTF3C2Q8WUA4 911 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
CTNNA1-205ENST00000517904 TTC28Q96AY4 2481 aa13.96□□□□□ -0.18
CTNNA1-205ENST00000517904 PNMA6EA0A0J9YXQ4 647 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 GNAI3P08754 354 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 ATN1P54259 1190 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 USP17L2Q6R6M4 530 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 EDC3Q96F86 508 aaKnown RBP13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 SAP30BPQ9UHR5 308 aaKnown RBP13.95□□□□□ -0.18
CTNNA1-205ENST00000517904 GH2P01242 217 aa13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 PLCG2P16885 1265 aa13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 RABGAP1Q9Y3P9 1069 aa13.94□□□□□ -0.18
CTNNA1-205ENST00000517904 PTPREP23469 700 aa13.93□□□□□ -0.18
CTNNA1-205ENST00000517904 DYNLL1P63167 89 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms