RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CARD10Q9BWT7 1032 aa4.79□□□□□ -1.64
RNU6-840P-201ENST00000517275 METTL14Q9HCE5 456 aaKnown RBP4.79□□□□□ -1.64
RNU6-840P-201ENST00000517275 CRIM1Q9NZV1 1036 aa4.79□□□□□ -1.64
RNU6-840P-201ENST00000517275 HIF3AQ9Y2N7 669 aa4.79□□□□□ -1.64
RNU6-840P-201ENST00000517275 LEMD3Q9Y2U8 911 aa4.79□□□□□ -1.64
RNU6-840P-201ENST00000517275 KDM2BQ8NHM5 1336 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 DLL1O00548 723 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 RGS13O14921 159 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 PPP1R12AO14974 1030 aaPredicted RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 DEAF1O75398 565 aaPredicted RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 RFPL3O75679 317 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 ADAMTS2O95450 1211 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 DLGAP3O95886 979 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 PGRP06401 933 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 SLFN14P0C7P3 912 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 NAT2P11245 290 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 HOXB4P17483 251 aaPredicted RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 LIG1P18858 919 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 GRK4P32298 578 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 CD68P34810 354 aaPredicted RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 PMS1P54277 932 aaKnown RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 TKFCQ3LXA3 575 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 KRT26Q7Z3Y9 468 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 RPUSD2Q8IZ73 545 aaKnown RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 KCT2Q8NC54 265 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 BTBD6Q96KE9 485 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 ZC3H12CQ9C0D7 883 aaKnown RBP4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 TJP2Q9UDY2 1190 aa4.78□□□□□ -1.64
RNU6-840P-201ENST00000517275 PRAMEF27A3QJZ7 478 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 DCDC2CA8MYV0 355 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 RAB11FIP3O75154 756 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 CAPNS1P04632 268 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 GYS2P54840 703 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 ANAPC15P60006 121 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 SLC7A5Q01650 507 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 DALRD3Q5D0E6 543 aaKnown RBP4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 EXOSC6Q5RKV6 272 aaKnown RBP4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 HID1Q8IV36 788 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 ZBTB38Q8NAP3 1195 aaPredicted RBP4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 TMEM87BQ96K49 555 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 DHRS1Q96LJ7 313 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 SPATA9Q9BWV2 254 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 USP26Q9BXU7 913 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 ATXN3LQ9H3M9 355 aa4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 SUCOQ9UBS9 1254 aaKnown RBP4.77□□□□□ -1.65
RNU6-840P-201ENST00000517275 ERBB4Q15303 1308 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 SHISA8B8ZZ34 492 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 TIAF1O95411 115 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 BCRP11274 1271 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 RAG1P15918 1043 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 MASP1P48740 699 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 NLRP12P59046 1061 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 AMPD3Q01432 767 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 TM4SF20Q53R12 229 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 C8orf86Q6ZUL3 223 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 PPFIBP1Q86W92 1011 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 FBXO11Q86XK2 927 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 FMR1NBQ8N0W7 255 aaPredicted RBP4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 SMG8Q8ND04 991 aaKnown RBP4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 FAM13CQ8NE31 585 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 ZNF507Q8TCN5 953 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 IRF7Q92985 503 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 KISS1RQ969F8 398 aaPredicted RBP4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 FANCD2OSQ96PS1 177 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 SUSD2Q9UGT4 822 aa4.76□□□□□ -1.65
RNU6-840P-201ENST00000517275 ANKRD34BA5PLL1 514 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 CHURC1-FNTBB4DL54 471 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 TERTO14746 1132 aaKnown RBP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 KCNQ2O43526 872 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 UBOX5O94941 541 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 CST3P01034 146 aaPredicted RBP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 ADH5P11766 374 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 CDC25BP30305 580 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 ETF1P62495 437 aaKnown RBP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 ANKRD39Q53RE8 183 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 PPM1JQ5JR12 505 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 KIAA1211LQ6NV74 962 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 Q6ZNB5 142 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 C12orf40Q86WS4 652 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 ZNF513Q8N8E2 541 aaPredicted RBP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 GALNT6Q8NCL4 622 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 NINJ1Q92982 152 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 MFSD3Q96ES6 412 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 KLHL25Q9H0H3 589 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 RNF208Q9H0X6 261 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 DISC1Q9NRI5 854 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 KCNK4Q9NYG8 393 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 KLHL3Q9UH77 587 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 PPP1R9AQ9ULJ8 1098 aa4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 COL17A1Q9UMD9 1497 aaPredicted RBP4.75□□□□□ -1.65
RNU6-840P-201ENST00000517275 CBFA2T2O43439 604 aa4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 ASMTLO95671 621 aa4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 NEFMP07197 916 aa4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 FAM153BP0C7A2 387 aa4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 SLBPQ14493 270 aaKnown RBP eCLIP4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 FNDC3BQ53EP0 1204 aaKnown RBP4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 Q6ZS46 218 aa4.74□□□□□ -1.65
RNU6-840P-201ENST00000517275 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms