RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 IRAK4Q9NWZ3 460 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 NPATQ14207 1427 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 CPA1P15085 419 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 POLKQ9UBT6 870 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 ABI1Q8IZP0 508 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 TRIM31Q9BZY9 425 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 MFSD14BQ5SR56 506 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 BEND3Q5T5X7 828 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 RSPH3Q86UC2 560 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 CCDC26Q8TAB7 109 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
TRIM41-209ENST00000515834 ESYT2A0FGR8 921 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 CETN3O15182 167 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 PABPC4Q13310 644 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM41-209ENST00000515834 ARHGAP44Q17R89 818 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 GNPTABQ3T906 1256 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SEPT10Q9P0V9 454 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 GPAA1O43292 621 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 KCNA4P22459 653 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SETDB1Q15047 1291 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SEPT14Q6ZU15 432 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 AFAP1L2Q8N4X5 818 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 ARHGAP45Q92619 1136 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SYNJ2BP-COX16A0A087WUM0 186 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 FAM160A1Q05DH4 1040 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 ARHGEF6Q15052 776 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 CCDC121Q6ZUS5 278 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 DNAJC10Q8IXB1 793 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 METTL22Q9BUU2 404 aaPredicted RBP12.25□□□□□ -0.45
TRIM41-209ENST00000515834 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 GAS7O60861 476 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 TNNI3KQ59H18 835 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 TTC30AQ86WT1 665 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 UBL4BQ8N7F7 174 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 FPGT-TNNI3KV9GXZ4 949 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SLC12A2P55011 1212 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 TYRO3Q06418 890 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 CTTNBP2NLQ9P2B4 639 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 MNAT1P51948 309 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 PARD3BQ8TEW8 1205 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
TRIM41-209ENST00000515834 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 LRWD1Q9UFC0 647 aa12.25□□□□□ -0.45
TRIM41-209ENST00000515834 HGSO14964 777 aaPredicted RBP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 VIMP08670 466 aaKnown RBP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 DCAF15Q66K64 600 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 URB2Q14146 1524 aaKnown RBP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 CIB2O75838 187 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 VAV2P52735 878 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 VWA3BQ502W6 1294 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 CSGALNACT2Q8N6G5 542 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 TFAP4Q01664 338 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 TTC38Q5R3I4 469 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 DBNDD2Q9BQY9 259 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 NCOA5Q9HCD5 579 aaKnown RBP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 SAMD15Q9P1V8 674 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 POLR2DO15514 142 aaKnown RBP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 KRT81Q14533 505 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRIM41-209ENST00000515834 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 PPME1Q9Y570 386 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 UHRF1BP1Q6BDS2 1440 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 ELP1O95163 1332 aa12.24□□□□□ -0.45
TRIM41-209ENST00000515834 ERCC6LQ2NKX8 1250 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 RYBPQ8N488 228 aaPredicted RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 CHURC1Q8WUH1 139 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 ASIC3Q9UHC3 531 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 GOLGA6CA6NDK9 693 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 GOLGA6BA6NDN3 693 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 GOLGA6DP0CG33 693 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 SDCCAG8Q86SQ7 713 aaPredicted RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 LPIN2Q92539 896 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 RPS6KC1Q96S38 1066 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 GOLGA6AQ9NYA3 693 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 NAA25Q14CX7 972 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 ZBTB8OSQ8IWT0 167 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 UTP11Q9Y3A2 253 aaKnown RBP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRIM41-209ENST00000515834 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 FLOT1O75955 427 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 TRIM37O94972 964 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 RILPL1Q5EBL4 403 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 PHKBQ93100 1093 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 CHMP6Q96FZ7 201 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 ADPGKQ9BRR6 497 aa12.23□□□□□ -0.45
TRIM41-209ENST00000515834 ANKFY1Q9P2R3 1169 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms