RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 MCM10Q7L590 875 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 NOP9Q86U38 636 aaKnown RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 SLC16A10Q8TF71 515 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 STK31Q9BXU1 1019 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
SFXN1-211ENST00000515736 KCNMB2Q9Y691 235 aa10.12□□□□□ -0.79
SFXN1-211ENST00000515736 PNPLA7Q6ZV29 1317 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 COL24A1Q17RW2 1714 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 PKD1L3Q7Z443 1732 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 PHKA2P46019 1235 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 DCTN1Q14203 1278 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 BECN1Q14457 450 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 TAF7Q15545 349 aaPredicted RBP10.11□□□□□ -0.79
SFXN1-211ENST00000515736 ZCRB1Q8TBF4 217 aaKnown RBP10.11□□□□□ -0.79
SFXN1-211ENST00000515736 INSM2Q96T92 566 aaPredicted RBP10.11□□□□□ -0.79
SFXN1-211ENST00000515736 MEGF6O75095 1541 aa10.11□□□□□ -0.79
SFXN1-211ENST00000515736 C5P01031 1676 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 PHACTR2O75167 634 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 USP17L7P0C7H9 530 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 PLEKHO1Q53GL0 409 aaPredicted RBP10.1□□□□□ -0.79
SFXN1-211ENST00000515736 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 BTLAQ7Z6A9 289 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
SFXN1-211ENST00000515736 SRCIN1Q9C0H9 1055 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 ELP3Q9H9T3 547 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 TMEM63CQ9P1W3 806 aa10.1□□□□□ -0.79
SFXN1-211ENST00000515736 CCNL1Q9UK58 526 aaPredicted RBP10.1□□□□□ -0.79
SFXN1-211ENST00000515736 ATP10DQ9P241 1426 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 SPINT1O43278 529 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 HMMRO75330 724 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 ATP4AP20648 1035 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 GJA8P48165 433 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 CCDC144BQ3MJ40 725 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 BMP2KLQ5H9B9 411 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 VPS37DQ86XT2 251 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 USHBP1Q8N6Y0 703 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 RAPGEF4Q8WZA2 1011 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 TSEN34Q9BSV6 310 aaKnown RBP10.09□□□□□ -0.79
SFXN1-211ENST00000515736 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
SFXN1-211ENST00000515736 IBTKQ9P2D0 1353 aaPredicted RBP10.09□□□□□ -0.79
SFXN1-211ENST00000515736 ITGB4P16144 1822 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 TAF1LQ8IZX4 1826 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 ELL2O00472 640 aaPredicted RBP10.08□□□□□ -0.8
SFXN1-211ENST00000515736 NXPE4Q6UWF7 544 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 ERMP1Q7Z2K6 904 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 ANKRD44Q8N8A2 993 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 ZIC5Q96T25 663 aa10.08□□□□□ -0.8
SFXN1-211ENST00000515736 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
SFXN1-211ENST00000515736 TTC24A2A3L6 582 aaPredicted RBP10.07□□□□□ -0.8
SFXN1-211ENST00000515736 GNAI3P08754 354 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 NBPF6Q5VWK0 638 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 MCF2L2Q86YR7 1114 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 GALNT12Q8IXK2 581 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 NLGN2Q8NFZ4 835 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 NBPF4Q96M43 638 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 TBC1D32Q96NH3 1257 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 BCO2Q9BYV7 579 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 CHRDQ9H2X0 955 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
SFXN1-211ENST00000515736 POLMQ9NP87 494 aaPredicted RBP10.07□□□□□ -0.8
SFXN1-211ENST00000515736 POTECB2RU33 542 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 POLR3DP05423 398 aaPredicted RBP10.06□□□□□ -0.8
SFXN1-211ENST00000515736 FGRP09769 529 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 GRNP28799 593 aaKnown RBP10.06□□□□□ -0.8
SFXN1-211ENST00000515736 CTSOP43234 321 aaPredicted RBP10.06□□□□□ -0.8
SFXN1-211ENST00000515736 C1QTNF8P60827 252 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 POU4F2Q12837 409 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 C1orf141Q5JVX7 400 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 MSL1Q68DK7 614 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 IL17REQ8NFR9 667 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 LAMB4A4D0S4 1761 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
SFXN1-211ENST00000515736 MRC1P22897 1456 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 SMPD1P17405 629 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 ATF4P18848 351 aaPredicted RBP10.05□□□□□ -0.8
SFXN1-211ENST00000515736 PAK2Q13177 524 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 WDR44Q5JSH3 913 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 IFFO2Q5TF58 517 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 MPRIPQ6WCQ1 1025 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 LRRC69Q6ZNQ3 347 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 COL23A1Q86Y22 540 aaPredicted RBP10.05□□□□□ -0.8
SFXN1-211ENST00000515736 CYP4X1Q8N118 509 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 SUV39H2Q9H5I1 410 aa10.05□□□□□ -0.8
SFXN1-211ENST00000515736 TOGARAM1Q9Y4F4 1720 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 EREGO14944 169 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 GDF9O60383 454 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 TEFQ10587 303 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 COPRSQ9NQ92 184 aa10.04□□□□□ -0.8
SFXN1-211ENST00000515736 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms