RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 TJP2Q9UDY2 1190 aa7.97□□□□□ -1.13
SMARCA5-203ENST00000515531 E9PSI1 815 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 FOSL1P15407 271 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 RACK1P63244 317 aaKnown RBP7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 MLECQ14165 292 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 SEZ6Q53EL9 994 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 METTL16Q86W50 562 aaKnown RBP7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 MRPL41Q8IXM3 137 aaKnown RBP7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 XAGE3Q8WTP9 111 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 LRRC3Q9BY71 257 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 BRMS1Q9HCU9 246 aa7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 POLR3KQ9Y2Y1 108 aaPredicted RBP7.96□□□□□ -1.14
SMARCA5-203ENST00000515531 CST3P01034 146 aaPredicted RBP7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 YARSP54577 528 aaKnown RBP7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 PRAMEF13Q5VWM6 474 aa7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 ACSF2Q96CM8 615 aaPredicted RBP7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 EAF1Q96JC9 268 aaPredicted RBP7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 MIPEPQ99797 713 aa7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 REV1Q9UBZ9 1251 aa7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 GTF2IRD1Q9UHL9 959 aa7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 PRR36Q9H6K5 1346 aa7.95□□□□□ -1.14
SMARCA5-203ENST00000515531 HTR3BO95264 441 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 HOXA10P31260 410 aaPredicted RBP7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 CRKP46108 304 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 ZNF165P49910 485 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 TMEM201Q5SNT2 666 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 DPH2Q9BQC3 489 aaPredicted RBP7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 PCMTD2Q9NV79 361 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 TPX2Q9ULW0 747 aaKnown RBP7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 PCDHB14Q9Y5E9 798 aa7.94□□□□□ -1.14
SMARCA5-203ENST00000515531 TCF3P15923 654 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 CD97P48960 835 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 LRP8Q14114 963 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 ZNF746Q6NUN9 644 aaPredicted RBP7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 LETMD1Q6P1Q0 360 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 GK5Q6ZS86 529 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 KLHL3Q9UH77 587 aa7.93□□□□□ -1.14
SMARCA5-203ENST00000515531 UPK3BL1B0FP48 263 aa7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 UPK3BL2E5RIL1 263 aa7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 SLITRK5O94991 958 aa7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 SLITRK4Q8IW52 837 aa7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 REXO1Q8N1G1 1221 aaKnown RBP7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 PRDM5Q9NQX1 630 aaPredicted RBP7.92□□□□□ -1.14
SMARCA5-203ENST00000515531 HYAL3O43820 417 aaPredicted RBP7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 EOMESO95936 686 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 PAK2Q13177 524 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 ARTNQ5T4W7 220 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 RIN3Q8TB24 985 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 TGIF2Q9GZN2 237 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 CCSER2Q9H7U1 834 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 ZFP64Q9NPA5 681 aa7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 ZC3H7BQ9UGR2 993 aaKnown RBP7.91□□□□□ -1.14
SMARCA5-203ENST00000515531 ATE1O95260 518 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 MED26O95402 600 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 CYP7A1P22680 504 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 SLFN12Q8IYM2 578 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 PHACTR4Q8IZ21 702 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 FAM181AQ8N9Y4 354 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 EHMT1Q9H9B1 1298 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 MAPK8IP1Q9UQF2 711 aa7.9□□□□□ -1.14
SMARCA5-203ENST00000515531 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 CHURC1-FNTBB4DL54 471 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 ETV3P41162 512 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 CHMP4BP1P59074 171 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 CLCQ05315 142 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 CDH24Q86UP0 819 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 DTX1Q86Y01 620 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 NETO1Q8TDF5 533 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 SPATA32Q96LK8 384 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 HEXIM2Q96MH2 286 aaKnown RBP7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 BSDC1Q9NW68 430 aaPredicted RBP7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 GMIPQ9P107 970 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 INPP5FQ9Y2H2 1132 aa7.89□□□□□ -1.15
SMARCA5-203ENST00000515531 SLC22A31A6NKX4 558 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 KIAA1324LA8MWY0 1029 aaPredicted RBP7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 ITIH2P19823 946 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 GBP1P32455 592 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 TNNI2P48788 182 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 OXCT1P55809 520 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 LRRFIP1Q32MZ4 808 aaKnown RBP7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 SFRP5Q5T4F7 317 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 FAM214BQ7L5A3 538 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 CYB5D2Q8WUJ1 264 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 CCDC74BQ96LY2 380 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 ACBD3Q9H3P7 528 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
SMARCA5-203ENST00000515531 CEACAM5P06731 702 aa7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 RAG1P15918 1043 aa7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 IFI16Q16666 785 aaKnown RBP7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 MSMPQ1L6U9 139 aa7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 FBXW10Q5XX13 1052 aa7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 PLD6Q8N2A8 252 aaKnown RBP7.87□□□□□ -1.15
SMARCA5-203ENST00000515531 GPRASP2Q96D09 838 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms