RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 H7C1W4 665 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 PTPN5P54829 565 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 C16orf59Q7L2K0 433 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 ZFPM1Q8IX07 1006 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 PLA2G12BQ9BX93 195 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 FAM198AQ9UFP1 575 aa16.91■□□□□ 0.3
SMAD1-216ENST00000515527 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 APBB1O00213 710 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 RFXAPO00287 272 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 TIMP1P01033 207 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
SMAD1-216ENST00000515527 LRRC41Q15345 812 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 HFE2Q6ZVN8 426 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
SMAD1-216ENST00000515527 MFSD14AQ96MC6 490 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMAD1-216ENST00000515527 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 BRWD1Q9NSI6 2320 aa16.9■□□□□ 0.3
SMAD1-216ENST00000515527 DCXO43602 365 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 ACRP10323 421 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 HERVK_113P62684 666 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 ERVK-24P63145 666 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 Q3C1V9 767 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 PSRC1Q6PGN9 363 aaPredicted RBP16.89■□□□□ 0.29
SMAD1-216ENST00000515527 FAM178BQ8IXR5 827 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 PRSS33Q8NF86 280 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 PAGR1Q9BTK6 254 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
SMAD1-216ENST00000515527 PKD1L2Q7Z442 2459 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 GLRX3O76003 335 aaKnown RBP16.88■□□□□ 0.29
SMAD1-216ENST00000515527 SLURP2P0DP57 97 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 CYBAP13498 195 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 WDR78Q5VTH9 848 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 KRT40Q6A162 431 aa16.88■□□□□ 0.29
SMAD1-216ENST00000515527 MTIF3Q9H2K0 278 aaKnown RBP16.88■□□□□ 0.29
SMAD1-216ENST00000515527 POU3F3P20264 500 aaPredicted RBP16.87■□□□□ 0.29
SMAD1-216ENST00000515527 RABGGTBP53611 331 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 LDHAL6AQ6ZMR3 332 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 RBPJLQ9UBG7 517 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 ZNF521Q96K83 1311 aa16.87■□□□□ 0.29
SMAD1-216ENST00000515527 DCHS1Q96JQ0 3298 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 CSF2RAP15509 400 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 GCKRQ14397 625 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
SMAD1-216ENST00000515527 SAMD1Q6SPF0 538 aaPredicted RBP16.86■□□□□ 0.29
SMAD1-216ENST00000515527 PHF24Q9UPV7 400 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 SUGT1Q9Y2Z0 365 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 EPG5Q9HCE0 2579 aa16.86■□□□□ 0.29
SMAD1-216ENST00000515527 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 SEPT4O43236 478 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 SLC5A1P13866 664 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 MYOGP15173 224 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
SMAD1-216ENST00000515527 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
SMAD1-216ENST00000515527 RGS3P49796 1198 aa16.84■□□□□ 0.29
SMAD1-216ENST00000515527 NPLOC4Q8TAT6 608 aa16.84■□□□□ 0.29
SMAD1-216ENST00000515527 CERS4Q9HA82 394 aa16.84■□□□□ 0.29
SMAD1-216ENST00000515527 SLC15A5A6NIM6 579 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 MAP3K10Q02779 954 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 SH3D19Q5HYK7 790 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 FAM47AQ5JRC9 791 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 FBXO33Q7Z6M2 555 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 TOX2Q96NM4 488 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 TBC1D2Q9BYX2 928 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 FAM86C1Q9NVL1 165 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 TMOD4Q9NZQ9 345 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 IVNS1ABPQ9Y6Y0 642 aa16.83■□□□□ 0.28
SMAD1-216ENST00000515527 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 TRIOO75962 3097 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 A0A1W2PQ45 241 aaPredicted RBP16.82■□□□□ 0.28
SMAD1-216ENST00000515527 A0A1W2PQY0 241 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 HOXA7P31268 230 aaPredicted RBP16.82■□□□□ 0.28
SMAD1-216ENST00000515527 TMPOP42166 694 aaKnown RBP16.82■□□□□ 0.28
SMAD1-216ENST00000515527 ID4P47928 161 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 EPHA10Q5JZY3 1008 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 SH3BP5LQ7L8J4 393 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 ANKRD33Q7Z3H0 272 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 PCDHA11Q9Y5I1 949 aa16.82■□□□□ 0.28
SMAD1-216ENST00000515527 KMT2BQ9UMN6 2715 aaPredicted RBP16.81■□□□□ 0.28
SMAD1-216ENST00000515527 POTEB3A0JP26 581 aa16.81■□□□□ 0.28
SMAD1-216ENST00000515527 ELL2O00472 640 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms