RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 HSPD1P10809 573 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 EVA1CP58658 441 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ST5P78524 1137 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 SYNE4Q8N205 404 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 TTC30BQ8N4P2 665 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 TRIML1Q8N9V2 468 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ZBTB10Q96DT7 871 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 FAM89AQ96GI7 184 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 SRRTQ9BXP5 876 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 IRX2Q9BZI1 471 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ITM2BQ9Y287 266 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 COL5A3P25940 1745 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ELP1O95163 1332 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 MAP3K15Q6ZN16 1313 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 BCORQ6W2J9 1755 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 ZSCAN9O15535 394 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 KIF5CO60282 957 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 STK10O94804 968 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 CPP00450 1065 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 IFIT1P09914 478 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 PECAM1P16284 738 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 PRPHP41219 470 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 EXOSC10Q01780 885 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 SCRN1Q12765 414 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 SCARF1Q14162 830 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 TMEM110Q86TL2 294 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 FERMT3Q86UX7 667 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 UHMK1Q8TAS1 419 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 LRRC2Q9BYS8 371 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 USP25Q9UHP3 1055 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
PDLIM5-219ENST00000514743 SMTNL1A8MU46 457 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 MYL1P05976 194 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 HCLS1P14317 486 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 FOSBP53539 338 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 USP4Q13107 963 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC70Q6NSX1 233 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 SAPCD2Q86UD0 394 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 ZBTB38Q8NAP3 1195 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 SMARCC2Q8TAQ2 1214 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 TRIM11Q96F44 468 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 UBA5Q9GZZ9 404 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 KIF9Q9HAQ2 790 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 RNF113AO15541 343 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 CTDNEP1O95476 244 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 CRYMQ14894 314 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 HSP90B2PQ58FF3 399 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC112Q8NEF3 446 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 OSBP2Q969R2 916 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 TEKT1Q969V4 418 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 JPH2Q9BR39 696 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 NACA2Q9H009 215 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 ZSCAN16Q9H4T2 348 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 RABL2AQ9UBK7 228 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 COL4A1P02462 1669 aa8.49□□□□□ -1.05
PDLIM5-219ENST00000514743 CYP19A1P11511 503 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ZNF24P17028 368 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 GJA8P48165 433 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 FBXO38Q6PIJ6 1188 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 BRF1Q92994 677 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 SALL1Q9NSC2 1324 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 E7EWF7 191 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 SH3BP5O60239 455 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 PFKFB2O60825 505 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 VCAM1P19320 739 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 PDCP20941 246 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 CORO7P57737 925 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 RESTQ13127 1097 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC57Q2TAC2 916 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ACBD5Q5T8D3 534 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 GIMAP6Q6P9H5 292 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 NLRP10Q86W26 655 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 VGLL2Q8N8G2 317 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 TBC1D5Q92609 795 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 AGAP3Q96P47 875 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 CCDC85AQ96PX6 553 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 IRF2BPLQ9H1B7 796 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ATRNO75882 1429 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 PEX19P40855 299 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 LMAN1P49257 510 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ZBED6P86452 979 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ZNF394Q53GI3 561 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 MYSM1Q5VVJ2 828 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 LRRC31Q6UY01 552 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 DHX32Q7L7V1 743 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 SPATA21Q7Z572 469 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ABCC12Q96J65 1359 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 AKAP2Q9Y2D5 859 aa8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 ZNF330Q9Y3S2 320 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-219ENST00000514743 RAB27AP51159 221 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 KRT85P78386 507 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 TSNAXIP1Q2TAA8 658 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
PDLIM5-219ENST00000514743 TTLL11Q8NHH1 800 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms