RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 NAPGQ99747 312 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-213ENST00000514442 NEFHP12036 1026 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 ME3Q16798 604 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 PIK3AP1Q6ZUJ8 805 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 TAX1BP1Q86VP1 789 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 TGFBRAP1Q8WUH2 860 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 BICD1Q96G01 975 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 NCAPGQ9BPX3 1015 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 NAA15Q9BXJ9 866 aaKnown RBP14.74□□□□□ -0.05
TCOF1-213ENST00000514442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.05
TCOF1-213ENST00000514442 GNA11P29992 359 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 ADORA1P30542 326 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 MAP2K1Q02750 393 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-213ENST00000514442 FAM47AQ5JRC9 791 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 KRT79Q5XKE5 535 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 CAPN7Q9Y6W3 813 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 ARAP3Q8WWN8 1544 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 DEXIO95424 95 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 LONRF2Q1L5Z9 754 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 STXBP4Q6ZWJ1 553 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 YY1AP1Q9H869 796 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 ST7Q9NRC1 585 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 PSMA7O14818 248 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 TCP10Q12799 353 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
TCOF1-213ENST00000514442 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 CETN1Q12798 172 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 ZYXQ15942 572 aaKnown RBP14.73□□□□□ -0.05
TCOF1-213ENST00000514442 DIS3L2Q8IYB7 885 aaKnown RBP14.73□□□□□ -0.05
TCOF1-213ENST00000514442 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 MACROD2A1Z1Q3 448 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 AKR1B15C9JRZ8 316 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-213ENST00000514442 ZBTB21Q9ULJ3 1066 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 CROCC2H7BZ55 1655 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 NLRP12P59046 1061 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 ANO1Q5XXA6 986 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 DSCC1Q9BVC3 393 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 PKD2L1Q9P0L9 805 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 KCNJ14Q9UNX9 436 aa14.73□□□□□ -0.05
TCOF1-213ENST00000514442 DBNLQ9UJU6 430 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 ALKQ9UM73 1620 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 H0YIN7 160 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 NOP2P46087 812 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 SDR42E1Q8WUS8 393 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 TMCO5BA8MYB1 307 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 GIGYF2Q6Y7W6 1299 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 HAUS7Q99871 368 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 LLPHQ9BRT6 129 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 GEMIN8Q9NWZ8 242 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 EIF3CLB5ME19 914 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 AKR1B10O60218 316 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 CMTR1Q8N1G2 835 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 UIMC1Q96RL1 719 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 EIF3CQ99613 913 aaKnown RBP14.72□□□□□ -0.05
TCOF1-213ENST00000514442 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
TCOF1-213ENST00000514442 ANKARQ7Z5J8 1434 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 SP4Q02446 784 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 CHRNDQ07001 517 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 IFFO1Q0D2I5 559 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 GRM1Q13255 1194 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 SRLQ86TD4 932 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 ADAM21Q9UKJ8 722 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 KIF1CO43896 1103 aaKnown RBP14.71□□□□□ -0.05
TCOF1-213ENST00000514442 PHKA1P46020 1223 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 SLC20A2Q08357 652 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 PLA2G4DQ86XP0 818 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 CAPZA3Q96KX2 299 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 PDE6AP16499 860 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 TRAF1Q13077 416 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 RABEP2Q9H5N1 569 aa14.71□□□□□ -0.05
TCOF1-213ENST00000514442 HSPD1P10809 573 aaKnown RBP14.71□□□□□ -0.06
TCOF1-213ENST00000514442 GTF2IP78347 998 aa14.71□□□□□ -0.06
TCOF1-213ENST00000514442 BRINP3Q76B58 766 aa14.71□□□□□ -0.06
TCOF1-213ENST00000514442 SIRT2Q8IXJ6 389 aa14.71□□□□□ -0.06
TCOF1-213ENST00000514442 TTF2Q9UNY4 1162 aaKnown RBP14.71□□□□□ -0.06
TCOF1-213ENST00000514442 FAN1Q9Y2M0 1017 aa14.71□□□□□ -0.06
TCOF1-213ENST00000514442 AXIN2Q9Y2T1 843 aa14.71□□□□□ -0.06
TCOF1-213ENST00000514442 CEP152O94986 1710 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 KRT40Q6A162 431 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 FAM204AQ9H8W3 233 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 GOLGA6BA6NDN3 693 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 PPARAQ07869 468 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 RILPL1Q5EBL4 403 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 FCHSD1Q86WN1 690 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 LARGE2Q8N3Y3 721 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 SPAG5Q96R06 1193 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 HLTFQ14527 1009 aaKnown RBP eCLIP14.7□□□□□ -0.06
TCOF1-213ENST00000514442 SPATS2Q86XZ4 545 aaKnown RBP14.7□□□□□ -0.06
TCOF1-213ENST00000514442 USP17L12C9JPN9 530 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 USP17L21D6R901 530 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 TFAP4Q01664 338 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 PRPF4BQ13523 1007 aaKnown RBP14.7□□□□□ -0.06
TCOF1-213ENST00000514442 AKNAD1Q5T1N1 836 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 IQUBQ8NA54 791 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 CTNNBL1Q8WYA6 563 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-213ENST00000514442 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
TCOF1-213ENST00000514442 CCDC151A5D8V7 595 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms