RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	PHIP	Q8WWQ0	1821 aa		18.97	■□□□□ 0.63
SEC31A-238	ENST00000514326	ADGRA2	Q96PE1	1338 aa		18.97	■□□□□ 0.63
SEC31A-238	ENST00000514326	SALL3	Q9BXA9	1300 aa		18.97	■□□□□ 0.63
SEC31A-238	ENST00000514326	MYH1	P12882	1939 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	ERC2	O15083	957 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	GLRX3	O76003	335 aa	Known RBP	18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	GH2	P01242	217 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	SHMT1	P34896	483 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	PARK7	Q99497	189 aa	Known RBP	18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	WDR18	Q9BV38	432 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	TBC1D2	Q9BYX2	928 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	ARHGAP39	Q9C0H5	1083 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	AS3MT	Q9HBK9	375 aa		18.96	■□□□□ 0.63
SEC31A-238	ENST00000514326	SMIM22	K7EJ46	135 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	RNF113A	O15541	343 aa	Known RBP	18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	IRX6	P78412	446 aa	Predicted RBP	18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	GABPA	Q06546	454 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	MTMR2	Q13614	643 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	CERKL	Q49MI3	558 aa	Predicted RBP	18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	OSBP2	Q969R2	916 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	RWDD1	Q9H446	243 aa	Predicted RBP	18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	AGTPBP1	Q9UPW5	1226 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	SLC4A4	Q9Y6R1	1079 aa		18.95	■□□□□ 0.62
SEC31A-238	ENST00000514326	CYP2D7	A0A087X1C5	515 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	LACTB	P83111	547 aa	Predicted RBP	18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	SH3D19	Q5HYK7	790 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	B4GALNT3	Q6L9W6	998 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	SLC44A5	Q8NCS7	719 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	DYNLL2	Q96FJ2	89 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	STRBP	Q96SI9	672 aa	Known RBP	18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	ATP8A2	Q9NTI2	1148 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	GINM1	Q9NU53	330 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	PTPN22	Q9Y2R2	807 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	SLC45A1	Q9Y2W3	748 aa		18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	DDX60L	Q5H9U9	1706 aa	Known RBP	18.94	■□□□□ 0.62
SEC31A-238	ENST00000514326	CTGF	P29279	349 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	BACE1	P56817	501 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	ABCB5	Q2M3G0	1257 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	SMC5	Q8IY18	1101 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	APPBP2	Q92624	585 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	LNPK	Q9C0E8	428 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	STAP2	Q9UGK3	403 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	ATAD5	Q96QE3	1844 aa		18.93	■□□□□ 0.62
SEC31A-238	ENST00000514326	USP17L12	C9JPN9	530 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	USP17L21	D6R901	530 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326		M0R2C6	588 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	BCR	P11274	1271 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	RAB3GAP1	Q15042	981 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	NAV1	Q8NEY1	1877 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	PTPRF	P10586	1907 aa		18.92	■□□□□ 0.62
SEC31A-238	ENST00000514326	USP17L10	C9JJH3	530 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	ZFY	P08048	801 aa	Predicted RBP	18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	GUCY1A2	P33402	732 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	PDE1A	P54750	535 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	SOX10	P56693	466 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	KIF22	Q14807	665 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	C12orf60	Q5U649	245 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	TRIM47	Q96LD4	638 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	FSD1	Q9BTV5	496 aa		18.91	■□□□□ 0.62
SEC31A-238	ENST00000514326	GSG1L2	A8MUP6	293 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	PSMC4	P43686	418 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	SEPT2	Q15019	361 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	ARHGEF6	Q15052	776 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	CTR9	Q6PD62	1173 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	ACER1	Q8TDN7	264 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	SEC62	Q99442	399 aa	Known RBP	18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	CABP5	Q9NP86	173 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	EMILIN3	Q9NT22	766 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	TMOD4	Q9NZQ9	345 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	PTCH2	Q9Y6C5	1203 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	MYH7	P12883	1935 aa		18.9	■□□□□ 0.62
SEC31A-238	ENST00000514326	HTT	P42858	3142 aa		18.89	■□□□□ 0.62
SEC31A-238	ENST00000514326	ZSWIM8	A7E2V4	1837 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	C19orf81	C9J6K1	198 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	MPHOSPH10	O00566	681 aa	Known RBP	18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	GPAA1	O43292	621 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	ZYX	Q15942	572 aa	Known RBP	18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	DDRGK1	Q96HY6	314 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	SWAP70	Q9UH65	585 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	PNMA3	Q9UL41	463 aa		18.89	■□□□□ 0.61
SEC31A-238	ENST00000514326	FMNL1	O95466	1100 aa	Predicted RBP	18.88	■□□□□ 0.61
SEC31A-238	ENST00000514326	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
SEC31A-238	ENST00000514326	LRRFIP1	Q32MZ4	808 aa	Known RBP	18.88	■□□□□ 0.61
SEC31A-238	ENST00000514326	ANKRD13C	Q8N6S4	541 aa		18.88	■□□□□ 0.61
SEC31A-238	ENST00000514326	LOC285556	D6RIA3	1793 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	AKR1B1	P15121	316 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	OSBP	P22059	807 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	CDK8	P49336	464 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	NUCB1	Q02818	461 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	ZMYM1	Q5SVZ6	1142 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	USP17L2	Q6R6M4	530 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	CHD1L	Q86WJ1	897 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	AMOTL1	Q8IY63	956 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	FEZ1	Q99689	392 aa		18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.87	■□□□□ 0.61
SEC31A-238	ENST00000514326	HOXA7	P31268	230 aa	Predicted RBP	18.86	■□□□□ 0.61
SEC31A-238	ENST00000514326	RGS19	P49795	217 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms