RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 ZNF417Q8TAU3 575 aa6.95□□□□□ -1.3
CALCOCO2-222ENST00000514006 SGSM3Q96HU1 749 aa6.95□□□□□ -1.3
CALCOCO2-222ENST00000514006 ZNF587Q96SQ5 575 aaPredicted RBP6.95□□□□□ -1.3
CALCOCO2-222ENST00000514006 RAD18Q9NS91 495 aa6.95□□□□□ -1.3
CALCOCO2-222ENST00000514006 PCDHGC5Q9Y5F6 944 aa6.95□□□□□ -1.3
CALCOCO2-222ENST00000514006 S100BP04271 92 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 NAT2P11245 290 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 CNGA1P29973 690 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 ERVK-24P63145 666 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 ID3Q02535 119 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 RING1Q06587 406 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 SETDB1Q15047 1291 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 C8orf86Q6ZUL3 223 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 MCATQ8IVS2 390 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 NIM1KQ8IY84 436 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 PHACTR4Q8IZ21 702 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 GPR161Q8N6U8 529 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 NINJ1Q92982 152 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 MFSD3Q96ES6 412 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 TMEM87BQ96K49 555 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 DHRS1Q96LJ7 313 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 CHMP4AQ9BY43 222 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 IRF2BPLQ9H1B7 796 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 TYW1Q9NV66 732 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 SYNGAP1Q96PV0 1343 aa6.94□□□□□ -1.3
CALCOCO2-222ENST00000514006 FANCGO15287 622 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 DDX3YO15523 660 aaKnown RBP6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 ZNF143P52747 638 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 PMS1P54277 932 aaKnown RBP6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 SV2CQ496J9 727 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 TM4SF20Q53R12 229 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 SLFN12Q8IYM2 578 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 STAG1Q8WVM7 1258 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 SLC6A18Q96N87 628 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 TJP2Q9UDY2 1190 aa6.93□□□□□ -1.3
CALCOCO2-222ENST00000514006 TM4SF5O14894 197 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 ADAM11O75078 769 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 PARNO95453 639 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 PDGFRBP09619 1106 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 SLC6A19Q695T7 634 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 HID1Q8IV36 788 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 MRPL41Q8IXM3 137 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 CHAC2Q8WUX2 184 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 IPO9Q96P70 1041 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 CDC6Q99741 560 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 FAM86C1Q9NVL1 165 aa6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 SUCOQ9UBS9 1254 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
CALCOCO2-222ENST00000514006 ANKRD34BA5PLL1 514 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 IRS4O14654 1257 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 RGS13O14921 159 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 DLGAP3O95886 979 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 MYCLP1P12525 358 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 L1CAMP32004 1257 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 GBP1P32455 592 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 SRSF11Q05519 484 aaKnown RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 PABPC4Q13310 644 aaKnown RBP eCLIP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 AKAP4Q5JQC9 854 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 EXOSC6Q5RKV6 272 aaKnown RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 CCDC181Q5TID7 509 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 CHSY3Q70JA7 882 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 DMRTC2Q8IXT2 367 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 ZNF507Q8TCN5 953 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 DCAF11Q8TEB1 546 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 KIF2CQ99661 725 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 APBA2Q99767 749 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 COL25A1Q9BXS0 654 aaPredicted RBP6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 HOMER2Q9NSB8 354 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 LRP2BPQ9P2M1 347 aa6.91□□□□□ -1.3
CALCOCO2-222ENST00000514006 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 A0A1W2PQU0 124 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 RFPL3O75679 317 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 TP53P04637 393 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 STAT3P40763 770 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 CBX2Q14781 532 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 FOXD4L6Q3SYB3 417 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 CT47A1Q5JQC4 288 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 RNFT1Q5M7Z0 435 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 FOXB2Q5VYV0 432 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 TDRD10Q5VZ19 366 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 HEATR6Q6AI08 1181 aaKnown RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 FOXD4L3Q6VB84 417 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 CDC37L1Q7L3B6 337 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 FERMT3Q86UX7 667 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 PPFIBP1Q86W92 1011 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 THNSL2Q86YJ6 484 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 EXOC2Q96KP1 924 aa6.9□□□□□ -1.3
CALCOCO2-222ENST00000514006 CCDC74BQ96LY2 380 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms