RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FAM71BQ8TC56 605 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 IL25Q9H293 177 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 SAMSN1Q9NSI8 373 aaKnown RBP8.69□□□□□ -1.02
CLCN3-209ENST00000513761 KCNJ18B7U540 433 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 PLCD1P51178 756 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 KCNJ12Q14500 433 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 MCM9Q9NXL9 1143 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 CAPN7Q9Y6W3 813 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 MED14O60244 1454 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 TMEM110-MUSTN1A8MSY1 372 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 ATP8B1O43520 1251 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 VSTM4Q8IW00 320 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 FAM207AQ9NSI2 230 aaPredicted RBP8.69□□□□□ -1.02
CLCN3-209ENST00000513761 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
CLCN3-209ENST00000513761 ZMYM6O95789 1325 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 KIF4AO95239 1232 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 MAGEA1P43355 309 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 KIF23Q02241 960 aaPredicted RBP8.69□□□□□ -1.02
CLCN3-209ENST00000513761 ACRBPQ8NEB7 543 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 ANKRD7Q92527 254 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 TRIM31Q9BZY9 425 aa8.69□□□□□ -1.02
CLCN3-209ENST00000513761 NLRP1Q9C000 1473 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 MADDQ8WXG6 1647 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 MORC3Q14149 939 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 LRRC27Q9C0I9 530 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 KIF1BO60333 1816 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 FAM170AA1A519 330 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 TRAF5O00463 557 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 CCDC25Q86WR0 208 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 IFT20Q8IY31 132 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 M0R2C6 588 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 ZPR1O75312 459 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 GNAQP50148 359 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 SPATA1Q5VX52 437 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 CRACR2BQ8N4Y2 399 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 CCDC51Q96ER9 411 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 COPRSQ9NQ92 184 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.68□□□□□ -1.022e-6■■■■■ 41.9
CLCN3-209ENST00000513761 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 MAST3O60307 1309 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 IGSF1Q8N6C5 1336 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 METP08581 1390 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 CFAP74Q9C0B2 1584 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 NUTM2BA6NNL0 878 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 NUTM2EB1AL46 878 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 E7EVH7 732 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 TNNI2P48788 182 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 ZMYM1Q5SVZ6 1142 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 KRT79Q5XKE5 535 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 IFIH1Q9BYX4 1025 aaKnown RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 PPANQ9NQ55 473 aaKnown RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 HGSO14964 777 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 RNF40O75150 1001 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 C2CD5Q86YS7 1000 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 NOX5Q96PH1 765 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 MED4Q9NPJ6 270 aa8.68□□□□□ -1.02
CLCN3-209ENST00000513761 EPN1Q9Y6I3 576 aaPredicted RBP8.68□□□□□ -1.02
CLCN3-209ENST00000513761 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 BAG3O95817 575 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 ADORA1P30542 326 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 DHX40Q8IX18 779 aaKnown RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 MAN1B1Q9UKM7 699 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 ATP7BP35670 1465 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CDK12Q9NYV4 1490 aaPredicted RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 TOGARAM2Q6ZUX3 1019 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 SYCP3Q8IZU3 236 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 C6orf50Q9HD87 102 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 ABCB6Q9NP58 842 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 ADAM21Q9UKJ8 722 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 A0A1W2PRG0 241 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 VIMP08670 466 aaKnown RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 KCTD16Q68DU8 428 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 EXOC4Q96A65 974 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CSRNP2Q9H175 543 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 PRR36Q9H6K5 1346 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 C19orf44Q9H6X5 657 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 TBCAO75347 108 aaKnown RBP8.67□□□□□ -1.02
CLCN3-209ENST00000513761 MAP2K2P36507 400 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 AKNAD1Q5T1N1 836 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 TTLL7Q6ZT98 887 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 ZNF654Q8IZM8 581 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CABS1Q96KC9 395 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 MYO1CO00159 1063 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 CETN2P41208 172 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 RAD51AP2Q09MP3 1159 aa8.67□□□□□ -1.02
CLCN3-209ENST00000513761 PTPROQ16827 1216 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms