RNA–Protein interactions for RNA: ENST00000513609.1

CSF1R-206, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-206ENST00000513609 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
CSF1R-206ENST00000513609 MAGEB6Q8N7X4 407 aa16.17■□□□□ 0.18
CSF1R-206ENST00000513609 EAF2Q96CJ1 260 aaPredicted RBP16.17■□□□□ 0.18
CSF1R-206ENST00000513609 PAWRQ96IZ0 340 aaKnown RBP16.17■□□□□ 0.18
CSF1R-206ENST00000513609 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSF1R-206ENST00000513609 TLR7Q9NYK1 1049 aaKnown RBP16.17■□□□□ 0.18
CSF1R-206ENST00000513609 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
CSF1R-206ENST00000513609 GH2P01242 217 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 HERVK_113P62684 666 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 HSP90AB4PQ58FF6 505 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 UBE2Q1Q7Z7E8 422 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 PAGR1Q9BTK6 254 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 PAK6Q9NQU5 681 aaPredicted RBP16.16■□□□□ 0.18
CSF1R-206ENST00000513609 ZBTB21Q9ULJ3 1066 aa16.16■□□□□ 0.18
CSF1R-206ENST00000513609 APBB1O00213 710 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
CSF1R-206ENST00000513609 JAG1P78504 1218 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
CSF1R-206ENST00000513609 USP17L2Q6R6M4 530 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 MIER1Q8N108 512 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 CABP5Q9NP86 173 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 EXOC6BQ9Y2D4 811 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
CSF1R-206ENST00000513609 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
CSF1R-206ENST00000513609 MS4A1P11836 297 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 RLBP1P12271 317 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 MAPK4P31152 587 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.17
CSF1R-206ENST00000513609 WDR78Q5VTH9 848 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
CSF1R-206ENST00000513609 MORF4L1Q9UBU8 362 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 SERPINB13Q9UIV8 391 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 NDUFB9Q9Y6M9 179 aa16.14■□□□□ 0.17
CSF1R-206ENST00000513609 COL2A1P02458 1487 aaPredicted RBP16.14■□□□□ 0.17
CSF1R-206ENST00000513609 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 PEX10O60683 326 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
CSF1R-206ENST00000513609 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
CSF1R-206ENST00000513609 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
CSF1R-206ENST00000513609 CEP85Q6P2H3 762 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 TRMT44Q8IYL2 757 aaKnown RBP16.13■□□□□ 0.17
CSF1R-206ENST00000513609 PANK1Q8TE04 598 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 GTF3C2Q8WUA4 911 aaPredicted RBP16.13■□□□□ 0.17
CSF1R-206ENST00000513609 SOCS4Q8WXH5 440 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 CRISPLD2Q9H0B8 497 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 LAMB1P07942 1786 aa16.13■□□□□ 0.17
CSF1R-206ENST00000513609 MAGEB6P1A0A0J9YX57 407 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L15C9J2P7 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L13C9JLJ4 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L11C9JVI0 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L18D6R9N7 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L22D6RA61 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L17D6RBQ6 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L19D6RCP7 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L20D6RJB6 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 IFIT2P09913 472 aaKnown RBP16.12■□□□□ 0.17
CSF1R-206ENST00000513609 ZKSCAN1P17029 563 aaPredicted RBP16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP14P54578 494 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 USP17L24Q0WX57 530 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 TRIM32Q13049 653 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 ABCB5Q2M3G0 1257 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 TMED8Q6PL24 325 aaPredicted RBP16.12■□□□□ 0.17
CSF1R-206ENST00000513609 PLEKHH3Q7Z736 793 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
CSF1R-206ENST00000513609 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 IL1RAPL2Q9NP60 686 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 EMILIN3Q9NT22 766 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 RBPJLQ9UBG7 517 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 STAP2Q9UGK3 403 aa16.12■□□□□ 0.17
CSF1R-206ENST00000513609 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
CSF1R-206ENST00000513609 XRCC5P13010 732 aaKnown RBP16.11■□□□□ 0.17
CSF1R-206ENST00000513609 PRKAR2AP13861 404 aaKnown RBP16.11■□□□□ 0.17
CSF1R-206ENST00000513609 ERVK-9P63128 1117 aa16.11■□□□□ 0.17
CSF1R-206ENST00000513609 ERVK-24P63145 666 aa16.11■□□□□ 0.17
CSF1R-206ENST00000513609 CCNA1P78396 465 aa16.11■□□□□ 0.17
CSF1R-206ENST00000513609 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
CSF1R-206ENST00000513609 ANKLE1Q8NAG6 615 aa16.11■□□□□ 0.17
CSF1R-206ENST00000513609 HMMRO75330 724 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 RGS2P41220 211 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 Q3C1V9 767 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 TATDN1Q6P1N9 297 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 C7orf61Q8IZ16 206 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 DIS3LQ8TF46 1054 aaKnown RBP16.1■□□□□ 0.17
CSF1R-206ENST00000513609 TRIB2Q92519 343 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
CSF1R-206ENST00000513609 CRNKL1Q9BZJ0 848 aaKnown RBP16.1■□□□□ 0.17
CSF1R-206ENST00000513609 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
CSF1R-206ENST00000513609 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
CSF1R-206ENST00000513609 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
CSF1R-206ENST00000513609 EHD4Q9H223 541 aa16.09■□□□□ 0.17
CSF1R-206ENST00000513609 MCM9Q9NXL9 1143 aa16.09■□□□□ 0.17
CSF1R-206ENST00000513609 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms