RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 ANKEF1Q9NU02 776 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 KLHL11Q9NVR0 708 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZNF608Q9ULD9 1512 aaPredicted RBP7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 CLIP1P30622 1438 aa7.4□□□□□ -1.23
TRAPPC11-209ENST00000512476 AQRO60306 1485 aaKnown RBP eCLIP7.39□□□□□ -1.231e-6■■□□□ 11.4
TRAPPC11-209ENST00000512476 LOC102724428A0A0B4J2F2 783 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SERTM1A2A2V5 107 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 IPO5O00410 1097 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 L1CAMP32004 1257 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 NAP1L1P55209 391 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SIK1P57059 783 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 COL9A2Q14055 689 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 STAT4Q14765 748 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 HEATR6Q6AI08 1181 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SAMD14Q8IZD0 417 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 TNS4Q8IZW8 715 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 UHMK1Q8TAS1 419 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 CDK5RAP3Q96JB5 506 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 RMI1Q9H9A7 625 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 RSAD1Q9HA92 442 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 ARIH2O95376 493 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SETSIPP0DME0 302 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 PSMA3P25788 255 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 CHKAP35790 457 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 WWC2Q6AWC2 1192 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SWSAP1Q6NVH7 229 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 REM2Q8IYK8 340 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SPAG5Q96R06 1193 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 PRDM11Q9NQV5 511 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 RABL2AQ9UBK7 228 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 SAP30BPQ9UHR5 308 aaKnown RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 WASHC2AQ641Q2 1341 aa7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 FRMPD2Q68DX3 1309 aaPredicted RBP7.39□□□□□ -1.23
TRAPPC11-209ENST00000512476 ANO9A1A5B4 782 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 A6NNZ2 444 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 H0Y3Z8 333 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 HMGN5P82970 282 aaKnown RBP7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 PFKPQ01813 784 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 PTPN21Q16825 1174 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 PLA2G4EQ3MJ16 856 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 ZC3H12BQ5HYM0 836 aaKnown RBP7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 FAM47EQ6ZV65 393 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 NGEFQ8N5V2 710 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 DESI2Q9BSY9 194 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 NLRC4Q9NPP4 1024 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 GRIN2BQ13224 1484 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 PF4V1P10720 104 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 MECOMQ03112 1051 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 PTPN14Q15678 1187 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
TRAPPC11-209ENST00000512476 EIF4G3O43432 1585 aaKnown RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 M0R3H8 397 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 TMCC2O75069 709 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 FBXO24O75426 580 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ASGR2P07307 311 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 TPM2P07951 284 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ALDH5A1P51649 535 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 KCNC4Q03721 635 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 NUGGCQ68CJ6 796 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 LILRB1Q8NHL6 650 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 CFAP53Q96M91 514 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 PHF12Q96QT6 1004 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 RANBP17Q9H2T7 1088 aaKnown RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ACTR10Q9NZ32 417 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 STRIP2Q9ULQ0 834 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 SNCAIPQ9Y6H5 919 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 TRIM64A6NGJ6 449 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 TRIM64BA6NI03 449 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 GPR39O43194 453 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ADCY3O60266 1144 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 SLC4A1P02730 911 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 IDEP14735 1019 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 CASQ1P31415 396 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 MPP1Q00013 466 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 HIBCHQ6NVY1 386 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 GALNT12Q8IXK2 581 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ETFBKMTQ8IXQ9 262 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 C7orf61Q8IZ16 206 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 LSM14AQ8ND56 463 aaKnown RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ADAM32Q8TC27 787 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 ATP6V1E2Q96A05 226 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 PDLIM7Q9NR12 457 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 DCAF16Q9NXF7 216 aa7.37□□□□□ -1.23
TRAPPC11-209ENST00000512476 IL4RP24394 825 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 SSR1P43307 286 aaKnown RBP7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 USP14P54578 494 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 ARHGAP29Q52LW3 1261 aa7.36□□□□□ -1.23
TRAPPC11-209ENST00000512476 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms