RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 TOGARAM2Q6ZUX3 1019 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 NPAS3Q8IXF0 933 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 CHMP4CQ96CF2 233 aa7.55□□□□□ -1.2
CHD1-208ENST00000512392 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
CHD1-208ENST00000512392 TATP17735 454 aaPredicted RBP7.54□□□□□ -1.2
CHD1-208ENST00000512392 ECE1P42892 770 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 STK3Q13188 491 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 DDX10Q13206 875 aaKnown RBP7.54□□□□□ -1.2
CHD1-208ENST00000512392 SEPT2Q15019 361 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 C1orf228Q6PIY5 440 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 TBC1D20Q96BZ9 403 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 GAS2L1Q99501 681 aaPredicted RBP7.54□□□□□ -1.2
CHD1-208ENST00000512392 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 SLC5A4Q9NY91 659 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 FAM8A1Q9UBU6 413 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 IP6K2Q9UHH9 426 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 ZMYM5Q9UJ78 669 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 TNKSO95271 1327 aa7.54□□□□□ -1.2
CHD1-208ENST00000512392 RFPL1O75677 317 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 GJB6O95452 261 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 GBP2P32456 591 aaPredicted RBP7.53□□□□□ -1.2
CHD1-208ENST00000512392 TSPAN7P41732 249 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 CRKP46108 304 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 CASP7P55210 303 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 SSRP1Q08945 709 aaKnown RBP7.53□□□□□ -1.2
CHD1-208ENST00000512392 GALEQ14376 348 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 TUBB8Q3ZCM7 444 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 TNNI3KQ59H18 835 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 MSL1Q68DK7 614 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 MZT2AQ6P582 158 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 NXPE4Q6UWF7 544 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 EEPD1Q7L9B9 569 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ZBTB46Q86UZ6 589 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 OR8H2Q8N162 312 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
CHD1-208ENST00000512392 DGKBQ9Y6T7 804 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 GABRDO14764 452 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 MICAL2O94851 1124 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 FAM153BP0C7A2 387 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ITGA6P23229 1130 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ATICP31939 592 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 TXLNAP40222 546 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ZNF280AP59817 542 aaPredicted RBP7.53□□□□□ -1.2
CHD1-208ENST00000512392 WASHC5Q12768 1159 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 BIRC3Q13489 604 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 WDR45BQ5MNZ6 344 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 DACT2Q5SW24 774 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 SH3PXD2AQ5TCZ1 1133 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 WWC2Q6AWC2 1192 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 GOLGA1Q92805 767 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 GMCL1Q96IK5 515 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 NT5C1AQ9BXI3 368 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 OSGEPQ9NPF4 335 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ACTR10Q9NZ32 417 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 ACAD8Q9UKU7 415 aa7.53□□□□□ -1.2
CHD1-208ENST00000512392 MAP3K10Q02779 954 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 RIN3Q8TB24 985 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 GGNBP2Q9H3C7 697 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 CXorf56Q9H5V9 222 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 ZFATQ9P243 1243 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 FNIP2Q9P278 1114 aa7.52□□□□□ -1.21
CHD1-208ENST00000512392 GPC6Q9Y625 555 aaPredicted RBP7.52□□□□□ -1.21
CHD1-208ENST00000512392 E2F8A0AVK6 867 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 H7C1W4 665 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 NCAM1P13591 858 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 GLULP15104 373 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 ATP4AP20648 1035 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 GRM3Q14832 879 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 PRPF40BQ6NWY9 871 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 RIPOR1Q6ZS17 1223 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 PNMA8AQ86V59 439 aaPredicted RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 PAWRQ96IZ0 340 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 CAMKK2Q96RR4 588 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 PHACTR1Q9C0D0 580 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 OSBPL5Q9H0X9 879 aaPredicted RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 PHTF1Q9UMS5 762 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 ANO9A1A5B4 782 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 B2RBV5 119 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 TERTO14746 1132 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 STRN3Q13033 797 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 COL9A2Q14055 689 aaPredicted RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 LBRQ14739 615 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 PPP2R5EQ16537 467 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 GLIPR1L2Q4G1C9 344 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 FAM133BQ5BKY9 247 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 TRIM22Q8IYM9 498 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 WDR66Q8TBY9 1149 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 C7orf43Q8WVR3 580 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 GJA10Q969M2 543 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 CCDC74AQ96AQ1 378 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 CDHR1Q96JP9 859 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 TMEM74Q96NL1 305 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 NOC4LQ9BVI4 516 aaKnown RBP7.51□□□□□ -1.21
CHD1-208ENST00000512392 FBRSQ9HAH7 460 aa7.51□□□□□ -1.21
CHD1-208ENST00000512392 GPAMQ9HCL2 828 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms