RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 RGS16O15492 202 aaPredicted RBP16.02■□□□□ 0.16
TRIO-218ENST00000512070 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 FAM212AQ96EL1 285 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 PLS1Q14651 629 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 PDE4DQ08499 809 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 XAGE3Q8WTP9 111 aa16.02■□□□□ 0.16
TRIO-218ENST00000512070 H0YCG3 227 aa16.02■□□□□ 0.15
TRIO-218ENST00000512070 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.15
TRIO-218ENST00000512070 MIER3Q7Z3K6 550 aa16.02■□□□□ 0.15
TRIO-218ENST00000512070 EPS15L1Q9UBC2 864 aa16.02■□□□□ 0.15
TRIO-218ENST00000512070 IFIH1Q9BYX4 1025 aaKnown RBP16.02■□□□□ 0.15
TRIO-218ENST00000512070 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.15
TRIO-218ENST00000512070 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.15
TRIO-218ENST00000512070 MRPL50Q8N5N7 158 aaKnown RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 SAR1BQ9Y6B6 198 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 RAPGEF3O95398 923 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 HOXB7P09629 217 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 SFMBT2Q5VUG0 894 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIO-218ENST00000512070 VTI1AQ96AJ9 217 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 ZMYM4Q5VZL5 1548 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 ZNF75DP51815 510 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 RPS6KA2Q15349 733 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 ZCRB1Q8TBF4 217 aaKnown RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 RIC8AQ9NPQ8 531 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 WWC3Q9ULE0 1092 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 CCNT1O60563 726 aaKnown RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 SUDS3Q9H7L9 328 aaPredicted RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIO-218ENST00000512070 THAP12O43422 761 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 NLRP12P59046 1061 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 CCDC105Q8IYK2 499 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 CHMLP26374 656 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
TRIO-218ENST00000512070 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
TRIO-218ENST00000512070 STX17P56962 302 aa16■□□□□ 0.15
TRIO-218ENST00000512070 PPP1R21Q6ZMI0 780 aa16■□□□□ 0.15
TRIO-218ENST00000512070 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
TRIO-218ENST00000512070 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
TRIO-218ENST00000512070 FANCCQ00597 558 aa16■□□□□ 0.15
TRIO-218ENST00000512070 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
TRIO-218ENST00000512070 PDCD2Q16342 344 aaPredicted RBP16■□□□□ 0.15
TRIO-218ENST00000512070 PPP1R2P3Q6NXS1 205 aa16■□□□□ 0.15
TRIO-218ENST00000512070 POSTNQ15063 836 aa16■□□□□ 0.15
TRIO-218ENST00000512070 KRT71Q3SY84 523 aa16■□□□□ 0.15
TRIO-218ENST00000512070 AMFRQ9UKV5 643 aa16■□□□□ 0.15
TRIO-218ENST00000512070 SLC17A8Q8NDX2 589 aa16■□□□□ 0.15
TRIO-218ENST00000512070 RNF34Q969K3 372 aa16■□□□□ 0.15
TRIO-218ENST00000512070 BAG5Q9UL15 447 aa16■□□□□ 0.15
TRIO-218ENST00000512070 LMNB2Q03252 620 aa16■□□□□ 0.15
TRIO-218ENST00000512070 CCDC124Q96CT7 223 aaKnown RBP16■□□□□ 0.15
TRIO-218ENST00000512070 RILPQ96NA2 401 aa16■□□□□ 0.15
TRIO-218ENST00000512070 DNM3Q9UQ16 869 aa16■□□□□ 0.15
TRIO-218ENST00000512070 CEP85Q6P2H3 762 aa16■□□□□ 0.15
TRIO-218ENST00000512070 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
TRIO-218ENST00000512070 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
TRIO-218ENST00000512070 UHRF1BP1Q6BDS2 1440 aa16■□□□□ 0.15
TRIO-218ENST00000512070 A0A1B0GVL5 298 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 DDX27Q96GQ7 796 aaKnown RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 POLR2DO15514 142 aaKnown RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 ZNF202O95125 648 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 PNMA8AQ86V59 439 aaPredicted RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 IPO11Q9UI26 975 aaKnown RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 TEX14Q8IWB6 1497 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 STX2P32856 288 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 APOBRQ0VD83 1088 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 TSHZ3Q63HK5 1081 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 TRIM6Q9C030 488 aaPredicted RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 FOXO3O43524 673 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 JDP2Q8WYK2 163 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 MAGEF1Q9HAY2 307 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 DDX41Q9UJV9 622 aaKnown RBP15.99■□□□□ 0.15
TRIO-218ENST00000512070 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 RTEL1Q9NZ71 1219 aa15.99■□□□□ 0.15
TRIO-218ENST00000512070 SPZ1Q9BXG8 430 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 PLEKHM2Q8IWE5 1019 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 DNM2P50570 870 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 KRT12Q99456 494 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 TRPC6Q9Y210 931 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 ATP6V1AP38606 617 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 PUM3Q15397 648 aaKnown RBP15.98■□□□□ 0.15
TRIO-218ENST00000512070 CTTNBP2NLQ9P2B4 639 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 PLCH2O75038 1416 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 HMGB3O15347 200 aaKnown RBP15.98■□□□□ 0.15
TRIO-218ENST00000512070 ABCD1P33897 745 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 TRIM42Q8IWZ5 723 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 PCDHB15Q9Y5E8 787 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 BZW2Q9Y6E2 419 aaKnown RBP15.98■□□□□ 0.15
TRIO-218ENST00000512070 CCDC169A6NNP5 214 aa15.98■□□□□ 0.15
TRIO-218ENST00000512070 FAM71BQ8TC56 605 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms