RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
PDE4D-220ENST00000512069 IGF2BP3O00425 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
PDE4D-220ENST00000512069 SCAMP3O14828 347 aaKnown RBP7.77□□□□□ -1.17
PDE4D-220ENST00000512069 RECKO95980 971 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 IRAK1P51617 712 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 BNIP3Q12983 259 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 TMEM201Q5SNT2 666 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 VSIG10LQ86VR7 867 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 TP53INP2Q8IXH6 220 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 RNF34Q969K3 372 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 HEXIM2Q96MH2 286 aaKnown RBP7.77□□□□□ -1.17
PDE4D-220ENST00000512069 LRRC3Q9BY71 257 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 KIAA1522Q9P206 1035 aaPredicted RBP7.77□□□□□ -1.17
PDE4D-220ENST00000512069 TJP2Q9UDY2 1190 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 ADAMTS1Q9UHI8 967 aa7.77□□□□□ -1.17
PDE4D-220ENST00000512069 UNCXA6NJT0 531 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 SLITRK5O94991 958 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 EOMESO95936 686 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 FLCNQ8NFG4 579 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 TMEM87BQ96K49 555 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 GTF2IRD1Q9UHL9 959 aa7.76□□□□□ -1.17
PDE4D-220ENST00000512069 RBAK-RBAKDNI3L0D1 243 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 PLCG1P19174 1290 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 OXCT1P55809 520 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 ZNF574Q6ZN55 896 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-220ENST00000512069 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 REC114Q7Z4M0 266 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 SPRED2Q7Z698 418 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 FBXO27Q8NI29 283 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 NETO1Q8TDF5 533 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 BCL7CQ8WUZ0 217 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-220ENST00000512069 ACSF2Q96CM8 615 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-220ENST00000512069 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-220ENST00000512069 POLR3KQ9Y2Y1 108 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-220ENST00000512069 CORINQ9Y5Q5 1042 aa7.75□□□□□ -1.17
PDE4D-220ENST00000512069 TAL1P17542 331 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-220ENST00000512069 ITIH2P19823 946 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 PRAMEF13Q5VWM6 474 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 MCTP1Q6DN14 999 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 FBXL18Q96ME1 805 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 NT5C1AQ9BXI3 368 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 ADGRE2Q9UHX3 823 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 PLAGL2Q9UPG8 496 aa7.74□□□□□ -1.17
PDE4D-220ENST00000512069 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-220ENST00000512069 CD96P40200 585 aa7.73□□□□□ -1.17
PDE4D-220ENST00000512069 CWF19L2Q2TBE0 894 aaKnown RBP7.73□□□□□ -1.17
PDE4D-220ENST00000512069 USP48Q86UV5 1035 aa7.73□□□□□ -1.17
PDE4D-220ENST00000512069 METTL16Q86W50 562 aaKnown RBP7.73□□□□□ -1.17
PDE4D-220ENST00000512069 RIN3Q8TB24 985 aa7.73□□□□□ -1.17
PDE4D-220ENST00000512069 DDX41Q9UJV9 622 aaKnown RBP7.73□□□□□ -1.17
PDE4D-220ENST00000512069 SLC5A6Q9Y289 635 aa7.73□□□□□ -1.17
PDE4D-220ENST00000512069 TLR3O15455 904 aaKnown RBP7.72□□□□□ -1.17
PDE4D-220ENST00000512069 HTR3BO95264 441 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 LETMD1Q6P1Q0 360 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 WFDC3Q8IUB2 231 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 EAF1Q96JC9 268 aaPredicted RBP7.72□□□□□ -1.17
PDE4D-220ENST00000512069 MIPEPQ99797 713 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 SPON2Q9BUD6 331 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 MAPK8IP1Q9UQF2 711 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 SNX11Q9Y5W9 270 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 CNTNAP4Q9C0A0 1308 aa7.72□□□□□ -1.17
PDE4D-220ENST00000512069 UPK3BL1B0FP48 263 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 UPK3BL2E5RIL1 263 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 ATE1O95260 518 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 CEACAM5P06731 702 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
PDE4D-220ENST00000512069 RACK1P63244 317 aaKnown RBP7.71□□□□□ -1.18
PDE4D-220ENST00000512069 IFI16Q16666 785 aaKnown RBP7.71□□□□□ -1.18
PDE4D-220ENST00000512069 C22orf34Q6ZV56 151 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 KIAA0825Q8IV33 1275 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 SLFN12Q8IYM2 578 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 REXO1Q8N1G1 1221 aaKnown RBP7.71□□□□□ -1.18
PDE4D-220ENST00000512069 XAGE3Q8WTP9 111 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 MISP3Q96FF7 219 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 TNKS2Q9H2K2 1166 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 EHMT1Q9H9B1 1298 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 BRMS1Q9HCU9 246 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 PRDM5Q9NQX1 630 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-220ENST00000512069 REV1Q9UBZ9 1251 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 CEP131Q9UPN4 1083 aa7.71□□□□□ -1.18
PDE4D-220ENST00000512069 TMEM265A0A087WTH1 108 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 GRIN3BO60391 1043 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 CD8BP10966 210 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 CRKP46108 304 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 AOC3Q16853 763 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 ZNF394Q53GI3 561 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-220ENST00000512069 STK11IPQ8N1F8 1099 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 NKD1Q969G9 470 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 COX4I2Q96KJ9 171 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 VAV3Q9UKW4 847 aa7.7□□□□□ -1.18
PDE4D-220ENST00000512069 CYP7A1P22680 504 aa7.69□□□□□ -1.18
PDE4D-220ENST00000512069 APOBRQ0VD83 1088 aa7.69□□□□□ -1.18
PDE4D-220ENST00000512069 SFRP5Q5T4F7 317 aa7.69□□□□□ -1.18
PDE4D-220ENST00000512069 CDH24Q86UP0 819 aa7.69□□□□□ -1.18
PDE4D-220ENST00000512069 ZNF654Q8IZM8 581 aa7.69□□□□□ -1.18
PDE4D-220ENST00000512069 FAM13CQ8NE31 585 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms