RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
APBB3-219ENST00000511896 CALM1P0DP23 149 aa22.22■■□□□ 1.15
APBB3-219ENST00000511896 CALM2P0DP24 149 aa22.22■■□□□ 1.15
APBB3-219ENST00000511896 CALM3P0DP25 149 aa22.22■■□□□ 1.15
APBB3-219ENST00000511896 GUCY1A2P33402 732 aa22.22■■□□□ 1.15
APBB3-219ENST00000511896 MXD3Q9BW11 206 aa22.22■■□□□ 1.15
APBB3-219ENST00000511896 ZNF219Q9P2Y4 722 aaPredicted RBP22.22■■□□□ 1.15
APBB3-219ENST00000511896 TTF2Q9UNY4 1162 aaKnown RBP22.22■■□□□ 1.15
APBB3-219ENST00000511896 LIG1P18858 919 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 TFAP4Q01664 338 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 RCSD1Q6JBY9 416 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 MKNK2Q9HBH9 465 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 ECM29Q5VYK3 1845 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 DDAH1O94760 285 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 TRIM29Q14134 588 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 MYSM1Q5VVJ2 828 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 RBSNQ9H1K0 784 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 RTEL1Q9NZ71 1219 aa22.21■■□□□ 1.15
APBB3-219ENST00000511896 LETM1O95202 739 aaPredicted RBP22.2■■□□□ 1.14
APBB3-219ENST00000511896 DEXIO95424 95 aa22.2■■□□□ 1.14
APBB3-219ENST00000511896 SLC44A5Q8NCS7 719 aa22.2■■□□□ 1.14
APBB3-219ENST00000511896 KCNQ5Q9NR82 932 aa22.2■■□□□ 1.14
APBB3-219ENST00000511896 IL17RBQ9NRM6 502 aa22.19■■□□□ 1.14
APBB3-219ENST00000511896 FUT2Q10981 343 aa22.19■■□□□ 1.14
APBB3-219ENST00000511896 DGKHQ86XP1 1220 aa22.19■■□□□ 1.14
APBB3-219ENST00000511896 RNF26Q9BY78 433 aaPredicted RBP22.19■■□□□ 1.14
APBB3-219ENST00000511896 RBM28Q9NW13 759 aaKnown RBP22.19■■□□□ 1.14
APBB3-219ENST00000511896 TAOK2Q9UL54 1235 aa22.19■■□□□ 1.14
APBB3-219ENST00000511896 DDX60LQ5H9U9 1706 aaKnown RBP22.18■■□□□ 1.14
APBB3-219ENST00000511896 U2AF2P26368 475 aaKnown RBP eCLIP22.18■■□□□ 1.14
APBB3-219ENST00000511896 ZNF444Q8N0Y2 327 aaPredicted RBP22.18■■□□□ 1.14
APBB3-219ENST00000511896 ZNF287Q9HBT7 754 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 POLR3EQ9NVU0 708 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 SNED1Q8TER0 1413 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 RASA1P20936 1047 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 NASPP49321 788 aaPredicted RBP22.18■■□□□ 1.14
APBB3-219ENST00000511896 SCNN1DP51172 638 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 HHIPL2Q6UWX4 724 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 C16orf86Q6ZW13 317 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 BICD2Q8TD16 824 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 DACT1Q9NYF0 836 aa22.18■■□□□ 1.14
APBB3-219ENST00000511896 ECE2O60344 883 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 STRIP1Q5VSL9 837 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 ANKS1AQ92625 1134 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 TSPY26PQ9H489 355 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 TCP11L1Q9NUJ3 509 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 CLIC4Q9Y696 253 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 MYH1P12882 1939 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 C10orf71Q711Q0 1435 aa22.17■■□□□ 1.14
APBB3-219ENST00000511896 PLEKHA8P1O95397 391 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 TSPY3P0CV98 308 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 TSPY8P0CW00 308 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 CDK8P49336 464 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 LINC00301Q8NCQ3 95 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 SLC16A10Q8TF71 515 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 FOCADQ5VW36 1801 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 MMP1P03956 469 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 CCDC178Q5BJE1 867 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 CTCFLQ8NI51 663 aaPredicted RBP22.16■■□□□ 1.14
APBB3-219ENST00000511896 TEKT1Q969V4 418 aa22.16■■□□□ 1.14
APBB3-219ENST00000511896 SCN9AQ15858 1988 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 USP17L3A6NCW0 530 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 USP17L4A6NCW7 530 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 WDHD1O75717 1129 aaPredicted RBP22.15■■□□□ 1.14
APBB3-219ENST00000511896 YEATS4O95619 227 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 FKBP1AP62942 108 aaKnown RBP22.15■■□□□ 1.14
APBB3-219ENST00000511896 KIAA2012Q0VF49 1180 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 TMTC3Q6ZXV5 915 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 USP17L1Q7RTZ2 530 aa22.15■■□□□ 1.14
APBB3-219ENST00000511896 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.15■■□□□ 1.14
APBB3-219ENST00000511896 MYH6P13533 1939 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 PRPF3O43395 683 aaKnown RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 C21orf2O43822 256 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 NR1I2O75469 434 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 ME1P48163 572 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 AKAP17AQ02040 695 aaKnown RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 GNL2Q13823 731 aaKnown RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 PKN1Q16512 942 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 AOC3Q16853 763 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 DACT2Q5SW24 774 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 APOBEC3HQ6NTF7 200 aaKnown RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 KAT14Q9H8E8 782 aa22.14■■□□□ 1.14
APBB3-219ENST00000511896 DDX19AQ9NUU7 478 aaKnown RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 V9GY48 417 aaPredicted RBP22.14■■□□□ 1.14
APBB3-219ENST00000511896 PICALMQ13492 652 aa22.14■■□□□ 1.13
APBB3-219ENST00000511896 NUP62CLQ9H1M0 184 aa22.14■■□□□ 1.13
APBB3-219ENST00000511896 DDX4Q9NQI0 724 aaKnown RBP22.14■■□□□ 1.13
APBB3-219ENST00000511896 USP40Q9NVE5 1235 aa22.14■■□□□ 1.13
APBB3-219ENST00000511896 KCNJ14Q9UNX9 436 aa22.14■■□□□ 1.13
APBB3-219ENST00000511896 STK38Q15208 465 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 ANO1Q5XXA6 986 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 CDC42EP5Q6NZY7 148 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 SRBD1Q8N5C6 995 aaKnown RBP22.13■■□□□ 1.13
APBB3-219ENST00000511896 TTLL6Q8N841 843 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 PNMA1Q8ND90 353 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 KCNG4Q8TDN1 519 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 MRIQ9BWK5 157 aa22.13■■□□□ 1.13
APBB3-219ENST00000511896 PCDHA7Q9UN72 937 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms