RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ZKSCAN3Q9BRR0 538 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 NUF2Q9BZD4 464 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 NKIRAS1Q9NYS0 192 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 RTL1A6NKG5 1358 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 GTF2F1P35269 517 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP38-203ENST00000511739 Q6ZUG5 572 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 ZSCAN30Q86W11 494 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 NECAB1Q8N987 351 aa6.44□□□□□ -1.38
USP38-203ENST00000511739 MRRFQ96E11 262 aaKnown RBP6.44□□□□□ -1.38
USP38-203ENST00000511739 CTAGE9A4FU28 777 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 FAM83GA6ND36 823 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 GOLGA6CA6NDK9 693 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 GOLGA6BA6NDN3 693 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CHL1O00533 1208 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 PFDN6O15212 129 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CALUO43852 315 aaPredicted RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 GOLGA6DP0CG33 693 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 TNNC1P63316 161 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ITKQ08881 620 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 GNPTABQ3T906 1256 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 NCAPH2Q6IBW4 605 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 KSR2Q6VAB6 950 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 TAOK1Q7L7X3 1001 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 NLRX1Q86UT6 975 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 PSPC1Q8WXF1 523 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 GOLGA6AQ9NYA3 693 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 STK24Q9Y6E0 443 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 MAP3K19Q56UN5 1328 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 SPDYE2BA6NHP3 402 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 SPDYE6P0CI01 402 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 RLBP1P12271 317 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ATP6V1E1P36543 226 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 MAPK8IP2Q13387 824 aaPredicted RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 PARP10Q53GL7 1025 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 TSHZ3Q63HK5 1081 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 DCAF15Q66K64 600 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 SND1Q7KZF4 910 aaKnown RBP eCLIP6.43□□□□□ -1.38
USP38-203ENST00000511739 NFATC2IPQ8NCF5 419 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ADPGKQ9BRR6 497 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 KCNG1Q9UIX4 513 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 YWHAEP62258 255 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 ATP8B2P98198 1209 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 SKIV2LQ15477 1246 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 IQUBQ8NA54 791 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 IFT81Q8WYA0 676 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 PHACTR3Q96KR7 559 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 C19orf44Q9H6X5 657 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 SWAP70Q9UH65 585 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ABT1Q9ULW3 272 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 MED14O60244 1454 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CFBP00751 764 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 MYCP01106 439 aaPredicted RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 STX17P56962 302 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 FAM98CQ17RN3 349 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 USH1GQ495M9 461 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CPLX4Q7Z7G2 160 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CERS3Q8IU89 383 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 WDR66Q8TBY9 1149 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ZNF277Q9NRM2 450 aaPredicted RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 USP21Q9UK80 565 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 USTQ9Y2C2 406 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 RBM8AQ9Y5S9 174 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 RNF113AO15541 343 aaKnown RBP6.43□□□□□ -1.38
USP38-203ENST00000511739 SSFA2P28290 1259 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ATP5DP30049 168 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 UBE2HP62256 183 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 RPS6KA2Q15349 733 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 VWA3BQ502W6 1294 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 KIAA1841Q6NSI8 718 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 CCDC171Q6TFL3 1326 aa6.43□□□□□ -1.38
USP38-203ENST00000511739 ZBTB7BO15156 539 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 ATF7P17544 494 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 MTHFSDQ2M296 383 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 C1orf228Q6PIY5 440 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 SEPT14Q6ZU15 432 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 PPFIBP2Q8ND30 876 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CCDC26Q8TAB7 109 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 STMN2Q93045 179 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CAPZA3Q96KX2 299 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 TCEANC2Q96MN5 208 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 RPS6KC1Q96S38 1066 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 CCDC94Q9BW85 323 aaPredicted RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 BRPF3Q9ULD4 1205 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 ZC3H13Q5T200 1668 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 PLCD1P51178 756 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 OTUD6AQ7L8S5 288 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 DEPTORQ8TB45 409 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 EYA1Q99502 592 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 KIF9Q9HAQ2 790 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 ST7Q9NRC1 585 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 SAMD15Q9P1V8 674 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 PCDH11XQ9BZA7 1347 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 PCDH11YQ9BZA8 1340 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 PPP1R2P41236 205 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 RBBP5Q15291 538 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 LGSNQ5TDP6 509 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 BSPRYQ5W0U4 402 aa6.42□□□□□ -1.38
USP38-203ENST00000511739 INTS8Q75QN2 995 aaKnown RBP6.42□□□□□ -1.38
USP38-203ENST00000511739 DPP9Q86TI2 863 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms