RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 GH2P01242 217 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 HSPA8P11142 646 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 GSPT1P15170 499 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 SHMT1P34896 483 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 LBX1P52954 281 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 NMIQ13287 307 aaPredicted RBP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 FASTKD5Q7L8L6 764 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 IFNL3Q8IZI9 196 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 BRI3BPQ8WY22 251 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 NAPBQ9H115 298 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 AS3MTQ9HBK9 375 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 CABP5Q9NP86 173 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 PRDM10Q9NQV6 1147 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 PPP4R2Q9NY27 417 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 TSKSQ9UJT2 592 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 CDK5RAP2Q96SN8 1893 aa8.55□□□□□ -1.04
PDLIM5-215ENST00000511586 CYP2D7A0A087X1C5 515 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 A0A0D9SFI3 127 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 A0A0G2JLL6 359 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 TRIM75PA6NK02 468 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 MINDY4BA8MYZ0 360 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 BTBD19C9JJ37 291 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 GDF11O95390 407 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CDK8P49336 464 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 JAG1P78504 1218 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 EVX2Q03828 476 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 SPP2Q13103 211 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CWC27Q6UX04 472 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 C16orf86Q6ZW13 317 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 PRRT2Q7Z6L0 340 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CCDC84Q86UT8 332 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 DYNLL2Q96FJ2 89 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CCDC17Q96LX7 622 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 WDR18Q9BV38 432 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 ZNF287Q9HBT7 754 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 EPB41L4AQ9HCS5 686 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 ZCCHC17Q9NP64 241 aaKnown RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 ZBTB21Q9ULJ3 1066 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 MYH1P12882 1939 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 CCDC171Q6TFL3 1326 aa8.54□□□□□ -1.04
PDLIM5-215ENST00000511586 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 C19orf81C9J6K1 198 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 SMIM22K7EJ46 135 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 MPHOSPH10O00566 681 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 SLC3A2P08195 630 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 HSPD1P10809 573 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 RAB3GAP1Q15042 981 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 ALX1Q15699 326 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 SHROOM1Q2M3G4 852 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 GADL1Q6ZQY3 521 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 TMEM179Q6ZVK1 233 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 ANKRD23Q86SG2 305 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 FAM43AQ8N2R8 423 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 RUFY2Q8WXA3 655 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 MKNK2Q9HBH9 465 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 ZFYVE28Q9HCC9 887 aa8.53□□□□□ -1.04
PDLIM5-215ENST00000511586 DDX60LQ5H9U9 1706 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 ROBO3Q96MS0 1386 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 NAV1Q8NEY1 1877 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 GPR25O00155 361 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 PDHXO00330 501 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 FOXP2O15409 715 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 FGAP02671 866 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 CHMLP26374 656 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 HMGCS2P54868 508 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 BACE1P56817 501 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 PPARAQ07869 468 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 CRHR2Q13324 411 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 MOGSQ13724 837 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 SEPT2Q15019 361 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 TAF1CQ15572 869 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 NOM1Q5C9Z4 860 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 SH3D19Q5HYK7 790 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 VPS53Q5VIR6 699 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 ZNF444Q8N0Y2 327 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 STK11IPQ8N1F8 1099 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 TMOD4Q9NZQ9 345 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 AGTPBP1Q9UPW5 1226 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 SLC45A1Q9Y2W3 748 aa8.52□□□□□ -1.05
PDLIM5-215ENST00000511586 DOCK1Q14185 1865 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 AKR1B1P15121 316 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 PDE4BQ07343 736 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 MTMR2Q13614 643 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 BMP2KLQ5H9B9 411 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 GPAT2Q6NUI2 795 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
PDLIM5-215ENST00000511586 SKAP1Q86WV1 359 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms