RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 PPATQ06203 517 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 TSR1Q2NL82 804 aaKnown RBP11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 PDE6AP16499 860 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 SCYL3Q8IZE3 742 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 DBNDD2Q9BQY9 259 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
POLR2J3-215ENST00000511313 WDR46O15213 610 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 BMP2KLQ5H9B9 411 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 NEK1Q96PY6 1258 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 RTFDC1Q9BY42 306 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 SALL1Q9NSC2 1324 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 TIMM10P62072 90 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 SLFN13Q68D06 897 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 CKAP2LQ8IYA6 745 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 GPR101Q96P66 508 aaPredicted RBP11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 DEFB129Q9H1M3 183 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 PIK3C2AO00443 1686 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 RFX1P22670 979 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 CDC42EP1Q00587 391 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 ZNF532Q9HCE3 1301 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 LRRC37A3O60309 1634 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 FCER1AP12319 257 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 HSPA6P17066 643 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 TMOD1P28289 359 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 PDE1AP54750 535 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 MIGA1Q8NAN2 632 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 ZDHHC15Q96MV8 337 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 KATNAL1Q9BW62 490 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 TCP11L1Q9NUJ3 509 aa11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
POLR2J3-215ENST00000511313 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 RASSF7Q02833 373 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 PPIL2Q13356 520 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 ILDR2Q71H61 639 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 ZBTB40Q9NUA8 1239 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 DDNO94850 711 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 IL1R1P14778 569 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 FBXO33Q7Z6M2 555 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 GPRC5AQ8NFJ5 357 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 SAP30BPQ9UHR5 308 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 COL1A1P02452 1464 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 DDAH1O94760 285 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 NAPAP54920 295 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 CALML4Q96GE6 196 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 MROH8Q9H579 483 aa11.11□□□□□ -0.63
POLR2J3-215ENST00000511313 GPAA1O43292 621 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 SMC2O95347 1197 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 FGFR1OPO95684 399 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 BMP3P12645 472 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 MRC1P22897 1456 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 GCOM1H8Y6P7 765 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 CYP2E1P05181 493 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 POLR2MP0CAP2 368 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 SRGAP2BP0DMP2 458 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 UTYO14607 1347 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 DCDC2CA8MYV0 355 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 ZAP70P43403 619 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 CHST13Q8NET6 341 aa11.1□□□□□ -0.63
POLR2J3-215ENST00000511313 PLCH1Q4KWH8 1693 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 ABCB11O95342 1321 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 STRNO43815 780 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 CCDC129Q6ZRS4 1044 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 CDCA5Q96FF9 252 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 SLF1Q9BQI6 1058 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 AMNQ9BXJ7 453 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 PFASO15067 1338 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 PTPDC1A2A3K4 754 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 PPARAQ07869 468 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 RNF180Q86T96 592 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 TDRD3Q9H7E2 651 aaKnown RBP11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 NRBP2Q9NSY0 501 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
POLR2J3-215ENST00000511313 NUCB1Q02818 461 aa11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 COG2Q14746 738 aa11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 NSMFQ6X4W1 530 aa11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 FBXO11Q86XK2 927 aa11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 PCSK9Q8NBP7 692 aaKnown RBP11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 CAPNS2Q96L46 248 aa11.08□□□□□ -0.63
POLR2J3-215ENST00000511313 C10orf71Q711Q0 1435 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
POLR2J3-215ENST00000511313 USP17L21D6R901 530 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms