RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 MTMR2Q13614 643 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 TBC1D2Q9BYX2 928 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 AS3MTQ9HBK9 375 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 DCP1AQ9NPI6 582 aaPredicted RBP22.42■■□□□ 1.18
LSM6-206ENST00000510331 MCM9Q9NXL9 1143 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 SLC45A1Q9Y2W3 748 aa22.42■■□□□ 1.18
LSM6-206ENST00000510331 RBBP6Q7Z6E9 1792 aaKnown RBP22.41■■□□□ 1.18
LSM6-206ENST00000510331 CYP2D6P10635 497 aa22.41■■□□□ 1.18
LSM6-206ENST00000510331 UBE3CQ15386 1083 aa22.41■■□□□ 1.18
LSM6-206ENST00000510331 TTC6Q86TZ1 520 aa22.41■■□□□ 1.18
LSM6-206ENST00000510331 PROCA1Q8NCQ7 364 aaPredicted RBP22.41■■□□□ 1.18
LSM6-206ENST00000510331 GH2P01242 217 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 POLR3DP05423 398 aaPredicted RBP22.4■■□□□ 1.18
LSM6-206ENST00000510331 BCRP11274 1271 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 SHMT1P34896 483 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 WDR18Q9BV38 432 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 PTCH2Q9Y6C5 1203 aa22.4■■□□□ 1.18
LSM6-206ENST00000510331 TTC41PQ6P2S7 1318 aa22.39■■□□□ 1.18
LSM6-206ENST00000510331 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.17
LSM6-206ENST00000510331 KIF22Q14807 665 aa22.39■■□□□ 1.17
LSM6-206ENST00000510331 KBTBD3Q8NAB2 608 aa22.39■■□□□ 1.17
LSM6-206ENST00000510331 PI4K2BQ8TCG2 481 aa22.39■■□□□ 1.17
LSM6-206ENST00000510331 SMCR8Q8TEV9 937 aaPredicted RBP22.39■■□□□ 1.17
LSM6-206ENST00000510331 PUS7LQ9H0K6 701 aaKnown RBP22.39■■□□□ 1.17
LSM6-206ENST00000510331 SALL3Q9BXA9 1300 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 TNRC18O15417 2968 aaPredicted RBP22.38■■□□□ 1.17
LSM6-206ENST00000510331 MX1P20591 662 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 GABPAQ06546 454 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 SH3D19Q5HYK7 790 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 ZSCAN25Q6NSZ9 544 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 TRIM47Q96LD4 638 aa22.38■■□□□ 1.17
LSM6-206ENST00000510331 RGS19P49795 217 aa22.37■■□□□ 1.17
LSM6-206ENST00000510331 BACE1P56817 501 aa22.37■■□□□ 1.17
LSM6-206ENST00000510331 SLC44A5Q8NCS7 719 aa22.37■■□□□ 1.17
LSM6-206ENST00000510331 GINM1Q9NU53 330 aa22.37■■□□□ 1.17
LSM6-206ENST00000510331 SMIM22K7EJ46 135 aa22.36■■□□□ 1.17
LSM6-206ENST00000510331 PSMC4P43686 418 aa22.36■■□□□ 1.17
LSM6-206ENST00000510331 ARHGEF6Q15052 776 aa22.36■■□□□ 1.17
LSM6-206ENST00000510331 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
LSM6-206ENST00000510331 PNMA3Q9UL41 463 aa22.36■■□□□ 1.17
LSM6-206ENST00000510331 CYP2D7A0A087X1C5 515 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 RAB3GAP1Q15042 981 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 ABCB5Q2M3G0 1257 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 CERKLQ49MI3 558 aaPredicted RBP22.35■■□□□ 1.17
LSM6-206ENST00000510331 ANKRD45Q5TZF3 282 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 DYNLL2Q96FJ2 89 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 ATP8A2Q9NTI2 1148 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 SLC4A4Q9Y6R1 1079 aa22.35■■□□□ 1.17
LSM6-206ENST00000510331 KIAA0100Q14667 2235 aaKnown RBP22.34■■□□□ 1.17
LSM6-206ENST00000510331 USP17L10C9JJH3 530 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 ERC2O15083 957 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 GLRX3O76003 335 aaKnown RBP22.34■■□□□ 1.17
LSM6-206ENST00000510331 OSBPP22059 807 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 ZYXQ15942 572 aaKnown RBP22.34■■□□□ 1.17
LSM6-206ENST00000510331 ANKRD13CQ8N6S4 541 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 OSBP2Q969R2 916 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 ARMC5Q96C12 935 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 GCC1Q96CN9 775 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 ASCC2Q9H1I8 757 aaPredicted RBP22.34■■□□□ 1.17
LSM6-206ENST00000510331 TMOD4Q9NZQ9 345 aa22.34■■□□□ 1.17
LSM6-206ENST00000510331 RNF113AO15541 343 aaKnown RBP22.33■■□□□ 1.17
LSM6-206ENST00000510331 FMNL1O95466 1100 aaPredicted RBP22.33■■□□□ 1.17
LSM6-206ENST00000510331 GUCY1A2P33402 732 aa22.33■■□□□ 1.17
LSM6-206ENST00000510331 MLLT1Q03111 559 aaPredicted RBP22.33■■□□□ 1.17
LSM6-206ENST00000510331 APPBP2Q92624 585 aa22.33■■□□□ 1.17
LSM6-206ENST00000510331 FEZ1Q99689 392 aa22.33■■□□□ 1.17
LSM6-206ENST00000510331 MYPNQ86TC9 1320 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 M0R2C6 588 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 GNRH1P01148 92 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 FCGRTP55899 365 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 PABPC4Q13310 644 aaKnown RBP eCLIP22.32■■□□□ 1.16
LSM6-206ENST00000510331 SLC9C1Q4G0N8 1177 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 EMILIN3Q9NT22 766 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 ZBTB47Q9UFB7 747 aaPredicted RBP22.32■■□□□ 1.16
LSM6-206ENST00000510331 SRRDQ9UH36 339 aa22.32■■□□□ 1.16
LSM6-206ENST00000510331 GREB1LQ9C091 1923 aaPredicted RBP22.31■■□□□ 1.16
LSM6-206ENST00000510331 DOCK3Q8IZD9 2030 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 C19orf81C9J6K1 198 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 USP17L12C9JPN9 530 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 USP17L21D6R901 530 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 MPHOSPH10O00566 681 aaKnown RBP22.31■■□□□ 1.16
LSM6-206ENST00000510331 IRX3P78415 501 aaPredicted RBP22.31■■□□□ 1.16
LSM6-206ENST00000510331 PRKCZQ05513 592 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 AAMPQ13685 434 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 SEPT2Q15019 361 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 FAM110CQ1W6H9 321 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 ACER1Q8TDN7 264 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 SH3TC2Q8TF17 1288 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 ZNF333Q96JL9 665 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 STRBPQ96SI9 672 aaKnown RBP22.31■■□□□ 1.16
LSM6-206ENST00000510331 FSD1Q9BTV5 496 aa22.31■■□□□ 1.16
LSM6-206ENST00000510331 SUPT16HQ9Y5B9 1047 aaKnown RBP22.31■■□□□ 1.16
LSM6-206ENST00000510331 GPAA1O43292 621 aa22.3■■□□□ 1.16
LSM6-206ENST00000510331 ZFYP08048 801 aaPredicted RBP22.3■■□□□ 1.16
LSM6-206ENST00000510331 C12orf60Q5U649 245 aa22.3■■□□□ 1.16
LSM6-206ENST00000510331 CLEC10AQ8IUN9 316 aa22.3■■□□□ 1.16
LSM6-206ENST00000510331 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
LSM6-206ENST00000510331 EPB41L4AQ9HCS5 686 aaPredicted RBP22.3■■□□□ 1.16
LSM6-206ENST00000510331 CABP5Q9NP86 173 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms