RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 CYP2D7A0A087X1C5 515 aa9.53□□□□□ -0.88
PROM1-210ENST00000510224 PKN2Q16513 984 aaKnown RBP9.53□□□□□ -0.88
PROM1-210ENST00000510224 RAET1EQ8TD07 263 aa9.53□□□□□ -0.88
PROM1-210ENST00000510224 OSBP2Q969R2 916 aa9.53□□□□□ -0.88
PROM1-210ENST00000510224 GPAA1O43292 621 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 FASTKD5Q7L8L6 764 aaKnown RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 ANKRD13CQ8N6S4 541 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 APPBP2Q92624 585 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 IRX3P78415 501 aaPredicted RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 PARK7Q99497 189 aaKnown RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 PAGR1Q9BTK6 254 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 PTCH2Q9Y6C5 1203 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 ZFYP08048 801 aaPredicted RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 MTMR2Q13614 643 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
PROM1-210ENST00000510224 TMOD4Q9NZQ9 345 aa9.52□□□□□ -0.89
PROM1-210ENST00000510224 PHF20L1A8MW92 1017 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 USP17L12C9JPN9 530 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 USP17L21D6R901 530 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 GH2P01242 217 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 CYP2D6P10635 497 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 SDSP20132 328 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 ZNF280CQ8ND82 737 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 BRCA2P51587 3418 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 USP17L5A8MUK1 530 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 CXCL11O14625 94 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 CAP2P40123 477 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 UBE3CQ15386 1083 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
PROM1-210ENST00000510224 TTC22Q5TAA0 569 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 NBPF11Q86T75 865 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 NAPBQ9H115 298 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 CABP5Q9NP86 173 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 STAP2Q9UGK3 403 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 ZNF646O15015 1829 aaPredicted RBP9.51□□□□□ -0.89
PROM1-210ENST00000510224 M0R2C6 588 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 TNPO2O14787 897 aaKnown RBP9.51□□□□□ -0.89
PROM1-210ENST00000510224 PEX10O60683 326 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 LACTBP83111 547 aaPredicted RBP9.51□□□□□ -0.89
PROM1-210ENST00000510224 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 NACAP1Q9BZK3 213 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 MTMR7Q9Y216 660 aa9.51□□□□□ -0.89
PROM1-210ENST00000510224 ASNSP08243 561 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 SLC4A3P48751 1232 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 HAND2P61296 217 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 TREML2Q5T2D2 321 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 SERPINB13Q9UIV8 391 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 ZNF112Q9UJU3 913 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 HTTP42858 3142 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 A0A0D9SFI3 127 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 PRDM1O75626 825 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 CAP1Q01518 475 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 RRP1BQ14684 758 aaKnown RBP9.5□□□□□ -0.89
PROM1-210ENST00000510224 FOXP4Q8IVH2 680 aaPredicted RBP9.5□□□□□ -0.89
PROM1-210ENST00000510224 DYNLL2Q96FJ2 89 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 AS3MTQ9HBK9 375 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
PROM1-210ENST00000510224 SLC44A5Q8NCS7 719 aa9.5□□□□□ -0.89
PROM1-210ENST00000510224 CERKLQ49MI3 558 aaPredicted RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 RIOK1Q9BRS2 568 aaKnown RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 MKNK2Q9HBH9 465 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 AFG3L2Q9Y4W6 797 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 RPAP1Q9BWH6 1393 aaPredicted RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 ECM29Q5VYK3 1845 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 TESPA1A2RU30 521 aaPredicted RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 GSPT1P15170 499 aaKnown RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 HOXD10P28358 340 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 PLCD1P51178 756 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 PPP4CP60510 307 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 EVX2Q03828 476 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 ANKRD23Q86SG2 305 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 DCP1AQ9NPI6 582 aaPredicted RBP9.49□□□□□ -0.89
PROM1-210ENST00000510224 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 KIAA1211Q6ZU35 1233 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 KCNH4Q9UQ05 1017 aa9.49□□□□□ -0.89
PROM1-210ENST00000510224 TCRBV5S4A2TA0A5A2 114 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 SMIM22K7EJ46 135 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 ABCB5Q2M3G0 1257 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 MCMDC2Q4G0Z9 681 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 STRBPQ96SI9 672 aaKnown RBP9.48□□□□□ -0.89
PROM1-210ENST00000510224 USP17L10C9JJH3 530 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 ELNP15502 786 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 EN2P19622 333 aaPredicted RBP9.48□□□□□ -0.89
PROM1-210ENST00000510224 FCGRTP55899 365 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 VPS53Q5VIR6 699 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 CASC1Q6TDU7 716 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 PNMA3Q9UL41 463 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 ZBTB21Q9ULJ3 1066 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 SALL3Q9BXA9 1300 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 OSBPP22059 807 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 JAG1P78504 1218 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 PRKCZQ05513 592 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 NOL9Q5SY16 702 aaKnown RBP9.48□□□□□ -0.89
PROM1-210ENST00000510224 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 THSD7BQ9C0I4 1608 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 MYPNQ86TC9 1320 aa9.48□□□□□ -0.89
PROM1-210ENST00000510224 PABPC4Q13310 644 aaKnown RBP eCLIP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms