RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 EIF6P56537 245 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 TNIP1Q15025 636 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 STX1AQ16623 288 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 SARM1Q6SZW1 724 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 HHIPL2Q6UWX4 724 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 NACAP1Q9BZK3 213 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 MYH2Q9UKX2 1941 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 CRKP46108 304 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 FAM160A1Q05DH4 1040 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 MB21D2Q8IYB1 491 aaPredicted RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 IFNL3Q8IZI9 196 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 SH3RF3Q8TEJ3 882 aaPredicted RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 MRIQ9BWK5 157 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 NAPBQ9H115 298 aa18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 EPB41L4AQ9HCS5 686 aaPredicted RBP18.6■□□□□ 0.57
SQSTM1-213ENST00000510187 PSME4Q14997 1843 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 TDO2P48775 406 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 RBM5P52756 815 aaKnown RBP eCLIP18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 HDLBPQ00341 1268 aaKnown RBP18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 AGBL3Q8NEM8 1001 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 GMLQ99445 158 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 NCOA5Q9HCD5 579 aaKnown RBP18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 RTEL1Q9NZ71 1219 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 SERPINA10Q9UK55 444 aa18.59■□□□□ 0.57
SQSTM1-213ENST00000510187 PLCG2P16885 1265 aa18.58■□□□□ 0.57
SQSTM1-213ENST00000510187 ALX1Q15699 326 aa18.58■□□□□ 0.57
SQSTM1-213ENST00000510187 SPC24Q8NBT2 197 aa18.58■□□□□ 0.57
SQSTM1-213ENST00000510187 DNAJC25Q9H1X3 360 aa18.58■□□□□ 0.57
SQSTM1-213ENST00000510187 PYCARDQ9ULZ3 195 aa18.58■□□□□ 0.57
SQSTM1-213ENST00000510187 A0A1W2PQ27 194 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 A0A1W2PQ64 194 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 A0A1W2PQD8 194 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 KINO60870 393 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 OGFOD1Q8N543 542 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 ENGASEQ8NFI3 743 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 NCOA7Q8NI08 942 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 ZDHHC15Q96MV8 337 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 TRIM5Q9C035 493 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 HDAC9Q9UKV0 1011 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 ZMYM6O95789 1325 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 ZNF213O14771 459 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 PRC1O43663 620 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 FDPSP14324 419 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 USP5P45974 858 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 RHBDL3P58872 404 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 HAND2P61296 217 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 SNW1Q13573 536 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 APOBEC3HQ6NTF7 200 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 ATP8A2Q9NTI2 1148 aa18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-213ENST00000510187 YEATS4O95619 227 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 USP17L8P0C7I0 530 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 PTGS1P23219 599 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 IQCB1Q15051 598 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 RALYLQ86SE5 291 aaKnown RBP18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 TEX11Q8IYF3 940 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 GOLPH3LQ9H4A5 285 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 DCP1AQ9NPI6 582 aaPredicted RBP18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 ANO10Q9NW15 660 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 RNF181Q9P0P0 153 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 PCDHAC2Q9Y5I4 1007 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 GJA3Q9Y6H8 435 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
SQSTM1-213ENST00000510187 GOLGA6L19H0YKK7 550 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 CFAP100Q494V2 611 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 KCNG4Q8TDN1 519 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 TGFBRAP1Q8WUH2 860 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 USP40Q9NVE5 1235 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
SQSTM1-213ENST00000510187 GOLGA8BA8MQT2 603 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 RPS12P25398 132 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 ME1P48163 572 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 CEBPZQ03701 1054 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 ADALQ6DHV7 355 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 CHST3Q7LGC8 479 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 C17orf53Q8N3J3 647 aaPredicted RBP18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 FSIP1Q8NA03 581 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 MRFAP1L1Q96HT8 127 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 C8orf76Q96K31 380 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 POLR3EQ9NVU0 708 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 ADAMTSL1Q8N6G6 1762 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 KLF18A0A0U1RQI7 1052 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 RBM10P98175 930 aaKnown RBP18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 C9orf131Q5VYM1 1079 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 CDC42EP5Q6NZY7 148 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 CCDC186Q7Z3E2 898 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 DRC7Q8IY82 874 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.568e-6■■■□□ 15.4
SQSTM1-213ENST00000510187 HPS5Q9UPZ3 1129 aa18.54■□□□□ 0.56
SQSTM1-213ENST00000510187 SBF1O95248 1867 aa18.53■□□□□ 0.56
SQSTM1-213ENST00000510187 NEMFO60524 1076 aa18.53■□□□□ 0.56
SQSTM1-213ENST00000510187 GMPSP49915 693 aaPredicted RBP18.53■□□□□ 0.56
SQSTM1-213ENST00000510187 FOSBP53539 338 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms