RNA–Protein interactions for RNA: ENST00000509978.1

SPOCK1-207, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-207ENST00000509978 SLC10A6Q3KNW5 377 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 BBS9Q3SYG4 887 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 KIAA1211LQ6NV74 962 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 GALNT11Q8NCW6 608 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 ZNF417Q8TAU3 575 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 ZNF587Q96SQ5 575 aaPredicted RBP11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 HIF3AQ9Y2N7 669 aa11.32□□□□□ -0.6
SPOCK1-207ENST00000509978 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
SPOCK1-207ENST00000509978 DHRS1Q96LJ7 313 aa11.31□□□□□ -0.6
SPOCK1-207ENST00000509978 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
SPOCK1-207ENST00000509978 PRAMEF27A3QJZ7 478 aa11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 MARCH6O60337 910 aa11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 RAG1P15918 1043 aa11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 EXOSC6Q5RKV6 272 aaKnown RBP11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 LRRC4BQ9NT99 713 aa11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 KLHL3Q9UH77 587 aa11.3□□□□□ -0.6
SPOCK1-207ENST00000509978 DLGAP3O95886 979 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 NLRP12P59046 1061 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 ETF1P62495 437 aaKnown RBP11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 GNPTABQ3T906 1256 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 ZBTB37Q5TC79 503 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 CHSY3Q70JA7 882 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 MRPL41Q8IXM3 137 aaKnown RBP11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 DTWD1Q8N5C7 304 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 EDARADDQ8WWZ3 215 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 ACDQ96AP0 544 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 PCDHB10Q9UN67 800 aa11.29□□□□□ -0.6
SPOCK1-207ENST00000509978 RGS13O14921 159 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 ADAM11O75078 769 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 RFPL3O75679 317 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 ID3Q02535 119 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 RNFT1Q5M7Z0 435 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 BTBD6Q96KE9 485 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 CSADQ9Y600 493 aa11.28□□□□□ -0.6
SPOCK1-207ENST00000509978 NAT2P11245 290 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 HID1Q8IV36 788 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 FAM13CQ8NE31 585 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 ZNF507Q8TCN5 953 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 NINJ1Q92982 152 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 CRIM1Q9NZV1 1036 aa11.27□□□□□ -0.61
SPOCK1-207ENST00000509978 NID1P14543 1247 aa11.26□□□□□ -0.61
SPOCK1-207ENST00000509978 CAP2P40123 477 aa11.26□□□□□ -0.61
SPOCK1-207ENST00000509978 PPM1JQ5JR12 505 aa11.26□□□□□ -0.61
SPOCK1-207ENST00000509978 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
SPOCK1-207ENST00000509978 RAD18Q9NS91 495 aa11.26□□□□□ -0.61
SPOCK1-207ENST00000509978 MEGF11A6BM72 1044 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 AGRPO00253 132 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 TMPRSS2O15393 492 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 NTF4P34130 210 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 TM4SF20Q53R12 229 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 GALNT6Q8NCL4 622 aa11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 CWC22Q9HCG8 908 aaKnown RBP11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 SUCOQ9UBS9 1254 aaKnown RBP11.25□□□□□ -0.61
SPOCK1-207ENST00000509978 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 OIP5O43482 229 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 DEAF1O75398 565 aaPredicted RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 KCT2Q8NC54 265 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 KISS1RQ969F8 398 aaPredicted RBP11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 MFSD3Q96ES6 412 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 TMPRSS13Q9BYE2 586 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 KCNK4Q9NYG8 393 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 PPP1R9AQ9ULJ8 1098 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 MYO15BQ96JP2 1530 aa11.24□□□□□ -0.61
SPOCK1-207ENST00000509978 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 POLR2BP30876 1174 aaKnown RBP11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 PLEKHG6Q3KR16 790 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 TMEM192Q8IY95 271 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 STAG1Q8WVM7 1258 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 CCDC74BQ96LY2 380 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 IRF2BPLQ9H1B7 796 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 PICK1Q9NRD5 415 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 DISC1Q9NRI5 854 aa11.23□□□□□ -0.61
SPOCK1-207ENST00000509978 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 APBA2Q99767 749 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 ATXN3LQ9H3M9 355 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 SUGCTQ9HAC7 445 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 KLHL42Q9P2K6 505 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 SUSD2Q9UGT4 822 aa11.22□□□□□ -0.61
SPOCK1-207ENST00000509978 FAM86C2PA6NEL3 165 aa11.21□□□□□ -0.61
SPOCK1-207ENST00000509978 UBOX5O94941 541 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms