RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 SLC6A19Q695T7 634 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 ZNF765Q7L2R6 523 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 MCATQ8IVS2 390 aaKnown RBP11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 REXO1Q8N1G1 1221 aaKnown RBP11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 TMEM87BQ96K49 555 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 EHMT1Q9H9B1 1298 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 PRDM10Q9NQV6 1147 aa11.07□□□□□ -0.64
TRAPPC11-206ENST00000509857 GRIN3BO60391 1043 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 PAK2Q13177 524 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 TOP6BLQ8N6T0 577 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 MFSD2AQ8NA29 543 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 NKD1Q969G9 470 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 OSBPL1AQ9BXW6 950 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 REV1Q9UBZ9 1251 aa11.06□□□□□ -0.64
TRAPPC11-206ENST00000509857 LEFTY1O75610 366 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 TGFB1P01137 390 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 GJA8P48165 433 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 PRAMEF13Q5VWM6 474 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 SCRIBQ14160 1630 aa11.05□□□□□ -0.64
TRAPPC11-206ENST00000509857 CYP27C1Q4G0S4 372 aa11.04□□□□□ -0.64
TRAPPC11-206ENST00000509857 DUSP27Q5VZP5 1158 aa11.04□□□□□ -0.64
TRAPPC11-206ENST00000509857 SPATA32Q96LK8 384 aa11.04□□□□□ -0.64
TRAPPC11-206ENST00000509857 PCDHB14Q9Y5E9 798 aa11.04□□□□□ -0.64
TRAPPC11-206ENST00000509857 SLITRK5O94991 958 aa11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 ERCC5P28715 1186 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 ZNF165P49910 485 aa11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 CCSER2Q9H7U1 834 aa11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 LEMD3Q9Y2U8 911 aa11.03□□□□□ -0.64
TRAPPC11-206ENST00000509857 EOMESO95936 686 aa11.02□□□□□ -0.65
TRAPPC11-206ENST00000509857 FOSL1P15407 271 aa11.02□□□□□ -0.65
TRAPPC11-206ENST00000509857 SLFN12Q8IYM2 578 aa11.02□□□□□ -0.65
TRAPPC11-206ENST00000509857 GPRASP2Q96D09 838 aa11.02□□□□□ -0.65
TRAPPC11-206ENST00000509857 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
TRAPPC11-206ENST00000509857 DNAJA2O60884 412 aa11.01□□□□□ -0.65
TRAPPC11-206ENST00000509857 YARSP54577 528 aaKnown RBP11.01□□□□□ -0.65
TRAPPC11-206ENST00000509857 CLCQ05315 142 aa11.01□□□□□ -0.65
TRAPPC11-206ENST00000509857 COL9A2Q14055 689 aaPredicted RBP11□□□□□ -0.65
TRAPPC11-206ENST00000509857 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
TRAPPC11-206ENST00000509857 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
TRAPPC11-206ENST00000509857 FAM13CQ8NE31 585 aa11□□□□□ -0.65
TRAPPC11-206ENST00000509857 DPH2Q9BQC3 489 aaPredicted RBP11□□□□□ -0.65
TRAPPC11-206ENST00000509857 CD97P48960 835 aa10.99□□□□□ -0.65
TRAPPC11-206ENST00000509857 MLECQ14165 292 aa10.99□□□□□ -0.65
TRAPPC11-206ENST00000509857 LETMD1Q6P1Q0 360 aa10.99□□□□□ -0.65
TRAPPC11-206ENST00000509857 MIPEPQ99797 713 aa10.99□□□□□ -0.65
TRAPPC11-206ENST00000509857 GMIPQ9P107 970 aa10.99□□□□□ -0.65
TRAPPC11-206ENST00000509857 MEIS3P2A8K0S8 358 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 COBLO75128 1261 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 MCM4P33991 863 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 GRIK1P39086 918 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 SOX9P48436 509 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 GK5Q6ZS86 529 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 HEXIM2Q96MH2 286 aaKnown RBP10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 MKNK2Q9HBH9 465 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 ZNRF3Q9ULT6 936 aa10.98□□□□□ -0.65
TRAPPC11-206ENST00000509857 SLC22A31A6NKX4 558 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 UPK3BL1B0FP48 263 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 UPK3BL2E5RIL1 263 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 CYP26A1O43174 497 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 MSMPQ1L6U9 139 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 DNAJB8Q8NHS0 232 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 GTF2IRD1Q9UHL9 959 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 MAPK8IP1Q9UQF2 711 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 INPP5FQ9Y2H2 1132 aa10.97□□□□□ -0.65
TRAPPC11-206ENST00000509857 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 IMPDH2P12268 514 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 HOXA10P31260 410 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 XAGE3Q8WTP9 111 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 PPP1R13LQ8WUF5 828 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 GINM1Q9NU53 330 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 KLHL3Q9UH77 587 aa10.96□□□□□ -0.65
TRAPPC11-206ENST00000509857 TNNI2P48788 182 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 OXCT1P55809 520 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 LRP8Q14114 963 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 LRRFIP1Q32MZ4 808 aaKnown RBP10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 CDCP2Q5VXM1 449 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 OVOS1Q6IE37 1185 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 ZNF746Q6NUN9 644 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 C22orf34Q6ZV56 151 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 RIN3Q8TB24 985 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 TMEM40Q8WWA1 233 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 U3KQE9 123 aa10.95□□□□□ -0.66
TRAPPC11-206ENST00000509857 MED26O95402 600 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 SPINK2P20155 84 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 SEC16BQ96JE7 1060 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 CNNM2Q9H8M5 875 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 LRRC4CQ9HCJ2 640 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 EFR3BQ9Y2G0 817 aa10.94□□□□□ -0.66
TRAPPC11-206ENST00000509857 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
TRAPPC11-206ENST00000509857 RBBP8NLQ8NC74 664 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC11-206ENST00000509857 COX4I2Q96KJ9 171 aa10.93□□□□□ -0.66
TRAPPC11-206ENST00000509857 TINF2Q9BSI4 451 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms