RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GCLCP48506 637 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-202ENST00000509637 BACE1P56817 501 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 TTC39AQ5SRH9 613 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 TRIB2Q92519 343 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 HTATIP2Q9BUP3 242 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 ANTXR1Q9H6X2 564 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 EMILIN3Q9NT22 766 aa19.56■□□□□ 0.72
RAB40C-202ENST00000509637 SURF6O75683 361 aaKnown RBP19.55■□□□□ 0.72
RAB40C-202ENST00000509637 HOXA7P31268 230 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-202ENST00000509637 EVX2Q03828 476 aa19.55■□□□□ 0.72
RAB40C-202ENST00000509637 ZNF512BQ96KM6 892 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-202ENST00000509637 STAP2Q9UGK3 403 aa19.55■□□□□ 0.72
RAB40C-202ENST00000509637 PNMA3Q9UL41 463 aa19.55■□□□□ 0.72
RAB40C-202ENST00000509637 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
RAB40C-202ENST00000509637 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
RAB40C-202ENST00000509637 FOXP4Q8IVH2 680 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-202ENST00000509637 PORCNQ9H237 461 aa19.54■□□□□ 0.72
RAB40C-202ENST00000509637 DHX36Q9H2U1 1008 aaKnown RBP19.54■□□□□ 0.72
RAB40C-202ENST00000509637 CYP2B6P20813 491 aa19.53■□□□□ 0.72
RAB40C-202ENST00000509637 MAP3K21Q5TCX8 1036 aa19.53■□□□□ 0.72
RAB40C-202ENST00000509637 USP6NLQ92738 828 aa19.53■□□□□ 0.72
RAB40C-202ENST00000509637 TBC1D2Q9BYX2 928 aa19.53■□□□□ 0.72
RAB40C-202ENST00000509637 ZBTB21Q9ULJ3 1066 aa19.53■□□□□ 0.72
RAB40C-202ENST00000509637 CNMDO75829 334 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 HMGCRP04035 888 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 ASNSP08243 561 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 CYP7A1P22680 504 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 HERVK_113P62684 666 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 CCL14Q16627 93 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 CCDC158Q5M9N0 1113 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 MIGA1Q8NAN2 632 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 LRCH3Q96II8 777 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 NR2E3Q9Y5X4 410 aa19.52■□□□□ 0.72
RAB40C-202ENST00000509637 EVI5O60447 810 aa19.51■□□□□ 0.71
RAB40C-202ENST00000509637 BAG3O95817 575 aa19.51■□□□□ 0.71
RAB40C-202ENST00000509637 AS3MTQ9HBK9 375 aa19.51■□□□□ 0.71
RAB40C-202ENST00000509637 RPTORQ8N122 1335 aa19.51■□□□□ 0.71
RAB40C-202ENST00000509637 USP17L10C9JJH3 530 aa19.5■□□□□ 0.71
RAB40C-202ENST00000509637 GDF15Q99988 308 aa19.5■□□□□ 0.71
RAB40C-202ENST00000509637 ZMYND8Q9ULU4 1186 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-202ENST00000509637 MYH1P12882 1939 aa19.5■□□□□ 0.71
RAB40C-202ENST00000509637 DDX60LQ5H9U9 1706 aaKnown RBP19.49■□□□□ 0.71
RAB40C-202ENST00000509637 C19orf81C9J6K1 198 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 GH2P01242 217 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 PLCG2P16885 1265 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 GUCY1A2P33402 732 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 IRX3P78415 501 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-202ENST00000509637 PABPC4Q13310 644 aaKnown RBP eCLIP19.49■□□□□ 0.71
RAB40C-202ENST00000509637 OS9Q13438 667 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-202ENST00000509637 MORN1Q5T089 497 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 TATDN1Q6P1N9 297 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 ACER1Q8TDN7 264 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 HMX1Q9NP08 348 aaPredicted RBP19.49■□□□□ 0.71
RAB40C-202ENST00000509637 OGDHLQ9ULD0 1010 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 PFASO15067 1338 aa19.49■□□□□ 0.71
RAB40C-202ENST00000509637 PLCD1P51178 756 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 CACNB2Q08289 660 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-202ENST00000509637 CEP85Q6P2H3 762 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 NECAB2Q7Z6G3 386 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 CRACR2BQ8N4Y2 399 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-202ENST00000509637 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 GPRC5AQ8NFJ5 357 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 NOL10Q9BSC4 688 aaKnown RBP19.48■□□□□ 0.71
RAB40C-202ENST00000509637 TMOD4Q9NZQ9 345 aa19.48■□□□□ 0.71
RAB40C-202ENST00000509637 IDH1O75874 414 aaKnown RBP19.47■□□□□ 0.71
RAB40C-202ENST00000509637 PRKAR2AP13861 404 aaKnown RBP19.47■□□□□ 0.71
RAB40C-202ENST00000509637 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-202ENST00000509637 ERVK-9P63128 1117 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 ERVK-24P63145 666 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 LHX8Q68G74 356 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 C7orf61Q8IZ16 206 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 RIOK1Q9BRS2 568 aaKnown RBP19.47■□□□□ 0.71
RAB40C-202ENST00000509637 FLRT1Q9NZU1 646 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 EXOC6BQ9Y2D4 811 aa19.47■□□□□ 0.71
RAB40C-202ENST00000509637 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 SYN1P17600 705 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 SHMT1P34896 483 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 ZYXQ15942 572 aaKnown RBP19.46■□□□□ 0.71
RAB40C-202ENST00000509637 GPR142Q7Z601 462 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 ITPRIPQ8IWB1 547 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 PANK1Q8TE04 598 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 C12orf42Q96LP6 360 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 PAGR1Q9BTK6 254 aa19.46■□□□□ 0.71
RAB40C-202ENST00000509637 XRCC5P13010 732 aaKnown RBP19.45■□□□□ 0.7
RAB40C-202ENST00000509637 SLFNL1Q499Z3 407 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 USP17L2Q6R6M4 530 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 ANKLE1Q8NAG6 615 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 NUDT12Q9BQG2 462 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 GINM1Q9NU53 330 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 BTBD7Q9P203 1132 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 LAMA3Q16787 3333 aa19.45■□□□□ 0.7
RAB40C-202ENST00000509637 COL6A1P12109 1028 aa19.44■□□□□ 0.7
RAB40C-202ENST00000509637 KIAA1755Q5JYT7 1200 aa19.44■□□□□ 0.7
RAB40C-202ENST00000509637 NBPF3Q9H094 633 aa19.44■□□□□ 0.7
RAB40C-202ENST00000509637 IL1RAPL2Q9NP60 686 aa19.44■□□□□ 0.7
RAB40C-202ENST00000509637 A0A1W2PRG0 241 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 IGHA2P01877 340 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 CAPN2P17655 700 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 GABPAQ06546 454 aa19.43■□□□□ 0.7
RAB40C-202ENST00000509637 CATSPERGQ6ZRH7 1159 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms