RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SIPA1L1O43166 1804 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 PHIPQ8WWQ0 1821 aa22.5■■□□□ 1.19
UBE3D-207ENST00000509102 ERC2O15083 957 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 MBD4O95243 580 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 OSBPP22059 807 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 PSMC4P43686 418 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 LRRFIP1Q32MZ4 808 aaKnown RBP22.49■■□□□ 1.19
UBE3D-207ENST00000509102 SLC9C1Q4G0N8 1177 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 LCORLQ8N3X6 602 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 ARMT1Q9H993 441 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 CABP5Q9NP86 173 aa22.49■■□□□ 1.19
UBE3D-207ENST00000509102 C19orf81C9J6K1 198 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 FCGRTP55899 365 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 BACE1P56817 501 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 MTMR2Q13614 643 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 CERKLQ49MI3 558 aaPredicted RBP22.48■■□□□ 1.19
UBE3D-207ENST00000509102 SH3D19Q5HYK7 790 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 TATDN1Q6P1N9 297 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 ATP8A2Q9NTI2 1148 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 PTPRFP10586 1907 aa22.48■■□□□ 1.19
UBE3D-207ENST00000509102 USP17L10C9JJH3 530 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 GH2P01242 217 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 TREML2Q5T2D2 321 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 SDR42E1Q8WUS8 393 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 ARHGAP39Q9C0H5 1083 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 DCP1AQ9NPI6 582 aaPredicted RBP22.47■■□□□ 1.19
UBE3D-207ENST00000509102 TAOK2Q9UL54 1235 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 TTC41PQ6P2S7 1318 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 NAV1Q8NEY1 1877 aa22.47■■□□□ 1.19
UBE3D-207ENST00000509102 ECM2O94769 699 aaPredicted RBP22.46■■□□□ 1.19
UBE3D-207ENST00000509102 BCRP11274 1271 aa22.46■■□□□ 1.19
UBE3D-207ENST00000509102 GCLCP48506 637 aaPredicted RBP22.46■■□□□ 1.19
UBE3D-207ENST00000509102 ABCB5Q2M3G0 1257 aa22.46■■□□□ 1.19
UBE3D-207ENST00000509102 FEZ1Q99689 392 aa22.46■■□□□ 1.19
UBE3D-207ENST00000509102 PTCH2Q9Y6C5 1203 aa22.46■■□□□ 1.19
UBE3D-207ENST00000509102 PLCD1P51178 756 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 IRX3P78415 501 aaPredicted RBP22.45■■□□□ 1.18
UBE3D-207ENST00000509102 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 ARMC5Q96C12 935 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 GCC1Q96CN9 775 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 TRIM47Q96LD4 638 aa22.45■■□□□ 1.18
UBE3D-207ENST00000509102 GLRX3O76003 335 aaKnown RBP22.44■■□□□ 1.18
UBE3D-207ENST00000509102 ZFYP08048 801 aaPredicted RBP22.44■■□□□ 1.18
UBE3D-207ENST00000509102 CAP1Q01518 475 aa22.44■■□□□ 1.18
UBE3D-207ENST00000509102 RAET1EQ8TD07 263 aa22.44■■□□□ 1.18
UBE3D-207ENST00000509102 TMEM106CQ9BVX2 250 aa22.44■■□□□ 1.18
UBE3D-207ENST00000509102 SRRDQ9UH36 339 aa22.44■■□□□ 1.18
UBE3D-207ENST00000509102 SWAP70Q9UH65 585 aa22.44■■□□□ 1.18
UBE3D-207ENST00000509102 LOC285556D6RIA3 1793 aa22.43■■□□□ 1.18
UBE3D-207ENST00000509102 TSHZ3Q63HK5 1081 aa22.43■■□□□ 1.18
UBE3D-207ENST00000509102 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
UBE3D-207ENST00000509102 SLC4A4Q9Y6R1 1079 aa22.43■■□□□ 1.18
UBE3D-207ENST00000509102 MYH7P12883 1935 aa22.43■■□□□ 1.18
UBE3D-207ENST00000509102 MYPNQ86TC9 1320 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 MPHOSPH10O00566 681 aaKnown RBP22.42■■□□□ 1.18
UBE3D-207ENST00000509102 MX1P20591 662 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 SHMT1P34896 483 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 USP14P54578 494 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 JAG1P78504 1218 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 HDAC1Q13547 482 aaPredicted RBP22.42■■□□□ 1.18
UBE3D-207ENST00000509102 FAM110CQ1W6H9 321 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 ANKRD13CQ8N6S4 541 aa22.42■■□□□ 1.18
UBE3D-207ENST00000509102 ASCC2Q9H1I8 757 aaPredicted RBP22.42■■□□□ 1.18
UBE3D-207ENST00000509102 DDX60LQ5H9U9 1706 aaKnown RBP22.42■■□□□ 1.18
UBE3D-207ENST00000509102 HTTP42858 3142 aa22.41■■□□□ 1.18
UBE3D-207ENST00000509102 TNPO2O14787 897 aaKnown RBP22.41■■□□□ 1.18
UBE3D-207ENST00000509102 PRKAB2O43741 272 aa22.41■■□□□ 1.18
UBE3D-207ENST00000509102 GABPAQ06546 454 aa22.41■■□□□ 1.18
UBE3D-207ENST00000509102 SHROOM1Q2M3G4 852 aaPredicted RBP22.41■■□□□ 1.18
UBE3D-207ENST00000509102 SLFNL1Q499Z3 407 aa22.41■■□□□ 1.18
UBE3D-207ENST00000509102 APPBP2Q92624 585 aa22.41■■□□□ 1.18
UBE3D-207ENST00000509102 RNF113AO15541 343 aaKnown RBP22.4■■□□□ 1.18
UBE3D-207ENST00000509102 HOXA7P31268 230 aaPredicted RBP22.4■■□□□ 1.18
UBE3D-207ENST00000509102 COA7Q96BR5 231 aa22.4■■□□□ 1.18
UBE3D-207ENST00000509102 ZNF333Q96JL9 665 aa22.4■■□□□ 1.18
UBE3D-207ENST00000509102 PUS7LQ9H0K6 701 aaKnown RBP22.4■■□□□ 1.18
UBE3D-207ENST00000509102 GTF3C2Q8WUA4 911 aaPredicted RBP22.39■■□□□ 1.17
UBE3D-207ENST00000509102 RWDD1Q9H446 243 aaPredicted RBP22.39■■□□□ 1.17
UBE3D-207ENST00000509102 ARPP21Q9UBL0 812 aaPredicted RBP22.39■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L12C9JPN9 530 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 USP17L21D6R901 530 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 GNAT2P19087 354 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 CTGFP29279 349 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 ZYXQ15942 572 aaKnown RBP22.38■■□□□ 1.17
UBE3D-207ENST00000509102 C12orf60Q5U649 245 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 TMEM179Q6ZVK1 233 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 FSD1Q9BTV5 496 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 KIAA1683Q9H0B3 1180 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 BIN2Q9UBW5 565 aaPredicted RBP22.38■■□□□ 1.17
UBE3D-207ENST00000509102 ZSWIM8A7E2V4 1837 aa22.38■■□□□ 1.17
UBE3D-207ENST00000509102 CHGBP05060 677 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 CYP2D6P10635 497 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 GRK4P32298 578 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 PRKCZQ05513 592 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 PI4K2BQ8TCG2 481 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 SH3TC2Q8TF17 1288 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 C12orf42Q96LP6 360 aa22.37■■□□□ 1.17
UBE3D-207ENST00000509102 CCDC17Q96LX7 622 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms