RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 GFRA2O00451 464 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 FGD1P98174 961 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 ATP2B2Q01814 1243 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 SFRP5Q5T4F7 317 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 HDXQ7Z353 690 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 KSR1Q8IVT5 923 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 FAM84AQ96KN4 292 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 PCDHB5Q9Y5E4 795 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
LINC01088-205ENST00000509088 H3BS24 57 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 MLANAQ16655 118 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 CDKAL1Q5VV42 579 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 PRAMEF13Q5VWM6 474 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 LETMD1Q6P1Q0 360 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 MFSD2AQ8NA29 543 aa8.33□□□□□ -1.08
LINC01088-205ENST00000509088 TPX2Q9ULW0 747 aaKnown RBP8.33□□□□□ -1.08
LINC01088-205ENST00000509088 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
LINC01088-205ENST00000509088 CST3P01034 146 aaPredicted RBP8.32□□□□□ -1.08
LINC01088-205ENST00000509088 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
LINC01088-205ENST00000509088 GRK4P32298 578 aa8.32□□□□□ -1.08
LINC01088-205ENST00000509088 SEPT6Q14141 434 aa8.32□□□□□ -1.08
LINC01088-205ENST00000509088 HID1Q8IV36 788 aa8.32□□□□□ -1.08
LINC01088-205ENST00000509088 BHLHE22Q8NFJ8 381 aaPredicted RBP8.32□□□□□ -1.08
LINC01088-205ENST00000509088 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
LINC01088-205ENST00000509088 AFMP43652 599 aa8.31□□□□□ -1.08
LINC01088-205ENST00000509088 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
LINC01088-205ENST00000509088 FBLN7Q53RD9 439 aa8.31□□□□□ -1.08
LINC01088-205ENST00000509088 PRR23BQ6ZRT6 265 aa8.31□□□□□ -1.08
LINC01088-205ENST00000509088 KRT1P04264 644 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 GLI1P08151 1106 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 PDIA4P13667 645 aaKnown RBP8.3□□□□□ -1.08
LINC01088-205ENST00000509088 GNA15P30679 374 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 GDNFP39905 211 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 RPS26P62854 115 aaKnown RBP8.3□□□□□ -1.08
LINC01088-205ENST00000509088 KCNA1Q09470 495 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 PKN1Q16512 942 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 C1QL4Q86Z23 238 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 NPAS4Q8IUM7 802 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 XAGE3Q8WTP9 111 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 TRAIPQ9BWF2 469 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 FAM53CQ9NYF3 392 aa8.3□□□□□ -1.08
LINC01088-205ENST00000509088 TNK2Q07912 1038 aa8.29□□□□□ -1.08
LINC01088-205ENST00000509088 THAP5Q7Z6K1 395 aa8.29□□□□□ -1.08
LINC01088-205ENST00000509088 KIRREL1Q96J84 757 aa8.29□□□□□ -1.08
LINC01088-205ENST00000509088 SLC38A3Q99624 504 aa8.29□□□□□ -1.08
LINC01088-205ENST00000509088 TJP2Q9UDY2 1190 aa8.29□□□□□ -1.08
LINC01088-205ENST00000509088 KRTAP9-7A8MTY7 169 aa8.28□□□□□ -1.08
LINC01088-205ENST00000509088 CBX7O95931 251 aa8.28□□□□□ -1.08
LINC01088-205ENST00000509088 AGMOQ6ZNB7 445 aa8.28□□□□□ -1.08
LINC01088-205ENST00000509088 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
LINC01088-205ENST00000509088 DPH2Q9BQC3 489 aaPredicted RBP8.28□□□□□ -1.08
LINC01088-205ENST00000509088 TSPAN15O95858 294 aa8.27□□□□□ -1.09
LINC01088-205ENST00000509088 ESR1P03372 595 aa8.27□□□□□ -1.09
LINC01088-205ENST00000509088 EIF4BP23588 611 aaKnown RBP8.27□□□□□ -1.09
LINC01088-205ENST00000509088 CCDC85BQ15834 202 aaPredicted RBP8.27□□□□□ -1.09
LINC01088-205ENST00000509088 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
LINC01088-205ENST00000509088 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
LINC01088-205ENST00000509088 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
LINC01088-205ENST00000509088 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
LINC01088-205ENST00000509088 LIG3P49916 1009 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 DNAJB8Q8NHS0 232 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 UBE2FQ969M7 185 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 Q96M66 194 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 ALPK1Q96QP1 1244 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 AK5Q9Y6K8 562 aa8.26□□□□□ -1.09
LINC01088-205ENST00000509088 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
LINC01088-205ENST00000509088 CFPP27918 469 aa8.25□□□□□ -1.09
LINC01088-205ENST00000509088 RALGPS1Q5JS13 557 aa8.25□□□□□ -1.09
LINC01088-205ENST00000509088 MEI1Q5TIA1 1274 aa8.25□□□□□ -1.09
LINC01088-205ENST00000509088 ZNF746Q6NUN9 644 aaPredicted RBP8.25□□□□□ -1.09
LINC01088-205ENST00000509088 ZSWIM5Q9P217 1185 aa8.25□□□□□ -1.09
LINC01088-205ENST00000509088 DNAJC25-GNG10A0A024R161 153 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 KIR3DL1P43629 444 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
LINC01088-205ENST00000509088 MAP3K11Q16584 847 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 TMEM67Q5HYA8 995 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 LCNL1Q6ZST4 164 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 TMEM87BQ96K49 555 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 COX4I2Q96KJ9 171 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 KCNK12Q9HB15 430 aa8.24□□□□□ -1.09
LINC01088-205ENST00000509088 ERVFC1P60507 584 aa8.23□□□□□ -1.09
LINC01088-205ENST00000509088 SYDE1Q6ZW31 735 aaPredicted RBP8.23□□□□□ -1.09
LINC01088-205ENST00000509088 PPP1R13LQ8WUF5 828 aa8.23□□□□□ -1.09
LINC01088-205ENST00000509088 ACSF2Q96CM8 615 aaPredicted RBP8.23□□□□□ -1.09
LINC01088-205ENST00000509088 DUSP9Q99956 384 aaKnown RBP8.23□□□□□ -1.09
LINC01088-205ENST00000509088 DUSP15Q9H1R2 295 aaPredicted RBP8.23□□□□□ -1.09
LINC01088-205ENST00000509088 SLAMF8Q9P0V8 285 aa8.23□□□□□ -1.09
LINC01088-205ENST00000509088 PGRP06401 933 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 C1QTNF9P0C862 333 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 RAP1GAPP47736 663 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 GAB4Q2WGN9 574 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 KRTAP19-4Q3LI73 84 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 SLC6A19Q695T7 634 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 MPZL3Q6UWV2 235 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 SP110Q9HB58 689 aa8.22□□□□□ -1.09
LINC01088-205ENST00000509088 MCATQ8IVS2 390 aaKnown RBP8.21□□□□□ -1.1
LINC01088-205ENST00000509088 PIWIL2Q8TC59 973 aaKnown RBP8.21□□□□□ -1.1
LINC01088-205ENST00000509088 TLR6Q9Y2C9 796 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms