RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 K7ELQ4 463 aaPredicted RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 TBC1D12O60347 775 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 RANBP6O60518 1105 aaKnown RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 CPA1P15085 419 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 CDK8P49336 464 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 AK2P54819 239 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 RASA3Q14644 834 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 SLC4A8Q2Y0W8 1093 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 PPP4R3BQ5MIZ7 849 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 ANGEL2Q5VTE6 544 aaKnown RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 ZFPM1Q8IX07 1006 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 DCPSQ96C86 337 aaKnown RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 DYNLL2Q96FJ2 89 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
RFC1-211ENST00000509084 CCDC17Q96LX7 622 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 SIPA1L1O43166 1804 aa12.22□□□□□ -0.45
RFC1-211ENST00000509084 PRDM1O75626 825 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 RASA1P20936 1047 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 LIFRP42702 1097 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 ANTXR2P58335 489 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 Q6ZUG5 572 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 CYB5R4Q7L1T6 521 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 SH3BP5LQ7L8J4 393 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 STK11IPQ8N1F8 1099 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 TBC1D2Q9BYX2 928 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 DEFB129Q9H1M3 183 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
RFC1-211ENST00000509084 SH2B1Q9NRF2 756 aaPredicted RBP12.21□□□□□ -0.45
RFC1-211ENST00000509084 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
RFC1-211ENST00000509084 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
RFC1-211ENST00000509084 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.46
RFC1-211ENST00000509084 TNKSO95271 1327 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 SH2B2O14492 632 aaPredicted RBP12.2□□□□□ -0.46
RFC1-211ENST00000509084 IFIT3O14879 490 aaKnown RBP12.2□□□□□ -0.46
RFC1-211ENST00000509084 SHMT1P34896 483 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 HIRAP54198 1017 aaPredicted RBP12.2□□□□□ -0.46
RFC1-211ENST00000509084 TFAP4Q01664 338 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 TOB2Q14106 344 aaPredicted RBP12.2□□□□□ -0.46
RFC1-211ENST00000509084 WTAPQ15007 396 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 DCAF15Q66K64 600 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 NEDD1Q8NHV4 660 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 BRF1Q92994 677 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
RFC1-211ENST00000509084 TMEM39BQ9GZU3 492 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.46
RFC1-211ENST00000509084 TCP11L1Q9NUJ3 509 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
RFC1-211ENST00000509084 ASTN2O75129 1339 aaPredicted RBP12.19□□□□□ -0.46
RFC1-211ENST00000509084 SMIM22K7EJ46 135 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 VEGFAP15692 232 aaPredicted RBP12.19□□□□□ -0.46
RFC1-211ENST00000509084 RCAN1P53805 252 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 MAP3K10Q02779 954 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 TATDN1Q6P1N9 297 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
RFC1-211ENST00000509084 INCENPQ9NQS7 918 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 GINM1Q9NU53 330 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 PGAP2Q9UHJ9 254 aa12.19□□□□□ -0.46
RFC1-211ENST00000509084 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 CD2BP2O95400 341 aaKnown RBP12.18□□□□□ -0.46
RFC1-211ENST00000509084 EVCP57679 992 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
RFC1-211ENST00000509084 FAM47AQ5JRC9 791 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 IFIT1BQ5T764 474 aaKnown RBP12.18□□□□□ -0.46
RFC1-211ENST00000509084 SYNE3Q6ZMZ3 975 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 NFXL1Q6ZNB6 911 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 CHST3Q7LGC8 479 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 IGDCC4Q8TDY8 1250 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 ZNF274Q96GC6 653 aaPredicted RBP12.18□□□□□ -0.46
RFC1-211ENST00000509084 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 LRRC2Q9BYS8 371 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 DNAJC18Q9H819 358 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 LY9Q9HBG7 655 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 CABP5Q9NP86 173 aa12.18□□□□□ -0.46
RFC1-211ENST00000509084 GREB1LQ9C091 1923 aaPredicted RBP12.17□□□□□ -0.46
RFC1-211ENST00000509084 POTECB2RU33 542 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
RFC1-211ENST00000509084 CALM1P0DP23 149 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 CALM2P0DP24 149 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 CALM3P0DP25 149 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
RFC1-211ENST00000509084 SEC23AQ15436 765 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 EAPPQ56P03 285 aaPredicted RBP12.17□□□□□ -0.46
RFC1-211ENST00000509084 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
RFC1-211ENST00000509084 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 ZNF341Q9BYN7 854 aa12.17□□□□□ -0.46
RFC1-211ENST00000509084 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms