RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FMNL1O95466 1100 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 PSMC4P43686 418 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 SMCR8Q8TEV9 937 aaPredicted RBP17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 SDR42E1Q8WUS8 393 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 CRBNQ96SW2 442 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 HAUS7Q99871 368 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 CRNKL1Q9BZJ0 848 aaKnown RBP17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 DCTPP1Q9H773 170 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 ARMT1Q9H993 441 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 AS3MTQ9HBK9 375 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
UBE2D3-228ENST00000508974 POLR3DP05423 398 aaPredicted RBP17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 ASNSP08243 561 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 EVX2Q03828 476 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 MTMR2Q13614 643 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 METTL16Q86W50 562 aaKnown RBP17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 TRIM47Q96LD4 638 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 ZBTB21Q9ULJ3 1066 aa17.92■□□□□ 0.46
UBE2D3-228ENST00000508974 RBBP6Q7Z6E9 1792 aaKnown RBP17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 MBD4O95243 580 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 BCRP11274 1271 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 ADD2P35612 726 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 PLCD1P51178 756 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 TMED8Q6PL24 325 aaPredicted RBP17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 PROCA1Q8NCQ7 364 aaPredicted RBP17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 SH3TC2Q8TF17 1288 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.91■□□□□ 0.469e-7■■□□□ 13.5
UBE2D3-228ENST00000508974 ECHDC1Q9NTX5 307 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 SERPINB13Q9UIV8 391 aa17.91■□□□□ 0.46
UBE2D3-228ENST00000508974 POTEFA5A3E0 1075 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 GH2P01242 217 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 OSBPP22059 807 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 ANKRD13CQ8N6S4 541 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 MCM9Q9NXL9 1143 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 SLC45A1Q9Y2W3 748 aa17.9■□□□□ 0.46
UBE2D3-228ENST00000508974 PRKAB2O43741 272 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 CYP2D6P10635 497 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 ZYXQ15942 572 aaKnown RBP17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 ARMC5Q96C12 935 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 EHD4Q9H223 541 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 TMOD4Q9NZQ9 345 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 PNMA3Q9UL41 463 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 MYPNQ86TC9 1320 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 BRCA2P51587 3418 aa17.89■□□□□ 0.45
UBE2D3-228ENST00000508974 FCGRTP55899 365 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 CERKLQ49MI3 558 aaPredicted RBP17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 TATDN1Q6P1N9 297 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 WDR18Q9BV38 432 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 DCP1AQ9NPI6 582 aaPredicted RBP17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 SRRDQ9UH36 339 aa17.88■□□□□ 0.45
UBE2D3-228ENST00000508974 USP17L10C9JJH3 530 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 GNRH1P01148 92 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 SHMT1P34896 483 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 BACE1P56817 501 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 PRKCZQ05513 592 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 PABPC4Q13310 644 aaKnown RBP eCLIP17.87■□□□□ 0.454e-7■■■■□ 24.1
UBE2D3-228ENST00000508974 ABCB5Q2M3G0 1257 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 SH3D19Q5HYK7 790 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 NBPF11Q86T75 865 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 RAET1EQ8TD07 263 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 ZNF333Q96JL9 665 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 FEZ1Q99689 392 aa17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 ASCC2Q9H1I8 757 aaPredicted RBP17.87■□□□□ 0.45
UBE2D3-228ENST00000508974 MPHOSPH10O00566 681 aaKnown RBP17.86■□□□□ 0.45
UBE2D3-228ENST00000508974 HOXD10P28358 340 aa17.86■□□□□ 0.45
UBE2D3-228ENST00000508974 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
UBE2D3-228ENST00000508974 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
UBE2D3-228ENST00000508974 GABRQQ9UN88 632 aa17.86■□□□□ 0.45
UBE2D3-228ENST00000508974 CYP2D7A0A087X1C5 515 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 TNPO2O14787 897 aaKnown RBP17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 PEX10O60683 326 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 ATXN8OSP0DMR3 200 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 UBE3CQ15386 1083 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 ZSCAN25Q6NSZ9 544 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 DYNLL2Q96FJ2 89 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 TMEM106CQ9BVX2 250 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 PUS7LQ9H0K6 701 aaKnown RBP17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 CABP5Q9NP86 173 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 GINM1Q9NU53 330 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
UBE2D3-228ENST00000508974 DOCK3Q8IZD9 2030 aa17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 SMIM22K7EJ46 135 aa17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 EN2P19622 333 aaPredicted RBP17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 PRMT2P55345 433 aa17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 EMILIN3Q9NT22 766 aa17.84■□□□□ 0.45
UBE2D3-228ENST00000508974 KIAA0100Q14667 2235 aaKnown RBP17.83■□□□□ 0.45
UBE2D3-228ENST00000508974 GRK4P32298 578 aa17.83■□□□□ 0.44
UBE2D3-228ENST00000508974 GABPAQ06546 454 aa17.83■□□□□ 0.44
UBE2D3-228ENST00000508974 SEPT2Q15019 361 aa17.83■□□□□ 0.44
UBE2D3-228ENST00000508974 FAM110CQ1W6H9 321 aa17.83■□□□□ 0.44
UBE2D3-228ENST00000508974 KBTBD3Q8NAB2 608 aa17.83■□□□□ 0.44
UBE2D3-228ENST00000508974 ACER1Q8TDN7 264 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms