RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NAP1L4Q99733 375 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 CABP5Q9NP86 173 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 GEMIN8Q9NWZ8 242 aaKnown RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 ABCC4O15439 1325 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 ITSN2Q9NZM3 1697 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 VWA3AA6NCI4 1184 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 DNM2P50570 870 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 PDE4DQ08499 809 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 SDCCAG8Q86SQ7 713 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 EPN1Q9Y6I3 576 aaPredicted RBP8.12□□□□□ -1.11
UBE2D3-224ENST00000508474 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 HMGB1P1B2RPK0 211 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 ATF3P18847 181 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 COG7P83436 770 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 LONRF3Q496Y0 759 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 SPATA1Q5VX52 437 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 PEX26Q7Z412 305 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 CCDC65Q8IXS2 484 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 SLC35F6Q8N357 371 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 CXorf56Q9H5V9 222 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 BABAM1Q9NWV8 329 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TNFAIP3P21580 790 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 MCM7P33993 719 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 PSMC4P43686 418 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 PLCB3Q01970 1234 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 PNOCQ13519 176 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 INF2Q27J81 1249 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 MUM1L1Q5H9M0 696 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 ZNF274Q96GC6 653 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TUBB6Q9BUF5 446 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 CRNKL1Q9BZJ0 848 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 CHPF2Q9P2E5 772 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TRAPPC8Q9Y2L5 1435 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 LDHCP07864 332 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 LGSNQ5TDP6 509 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TCP11Q8WWU5 503 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 ABCB6Q9NP58 842 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TXLNGQ9NUQ3 528 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 SUFUQ9UMX1 484 aa8.11□□□□□ -1.11
UBE2D3-224ENST00000508474 TRAF5O00463 557 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 SPOPO43791 374 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 EEF2P13639 858 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 GNA11P29992 359 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ST5P78524 1137 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 TRAF1Q13077 416 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 EMBQ6PCB8 327 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ANKRD13DQ6ZTN6 518 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 FNBP4Q8N3X1 1017 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 DTNBP1Q96EV8 351 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 BATF3Q9NR55 127 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 FANCLQ9NW38 375 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 DRP2Q13474 957 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 CCDC14Q49A88 953 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 KLHL29Q96CT2 875 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ZMAT2Q96NC0 199 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 RUNDC3BQ96NL0 473 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 USP28Q96RU2 1077 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 PSD3Q9NYI0 1048 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 KCNJ18B7U540 433 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 H7C1D1 291 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 PFKFB2O60825 505 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 EPB41P11171 864 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 RNASE9P60153 205 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 NNTQ13423 1086 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 PDE1CQ14123 709 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 KCNJ12Q14500 433 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 KRT40Q6A162 431 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 CHST3Q7LGC8 479 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 WHAMMQ8TF30 809 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 INTS9Q9NV88 658 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 ASIC3Q9UHC3 531 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 SPATA31E1Q6ZUB1 1445 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 LMNAP02545 664 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 KLHL30Q0D2K2 578 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 BIRC2Q13490 618 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 DIS3L2Q8IYB7 885 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 SYNCQ9H7C4 482 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 RTEL1Q9NZ71 1219 aa8.1□□□□□ -1.11
UBE2D3-224ENST00000508474 JAK2O60674 1132 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 KRT15P19012 456 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 NR1D1P20393 614 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 NAPAP54920 295 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 SLC9C2Q5TAH2 1124 aa8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 HIBCHQ6NVY1 386 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-224ENST00000508474 VSTM4Q8IW00 320 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms