RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
HMGCLL1-208ENST00000508459 UNCXA6NJT0 531 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 B4E1Z4 1266 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 IFIT3O14879 490 aaKnown RBP16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 PLCD1P51178 756 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 EXOSC10Q01780 885 aaKnown RBP16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 MAP3K10Q02779 954 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 CPLX2Q6PUV4 134 aaKnown RBP16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 CDC37L1Q7L3B6 337 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 UPF3BQ9BZI7 483 aaKnown RBP16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 SH2D4AQ9H788 454 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 KIF3AQ9Y496 699 aa16.93■□□□□ 0.3
HMGCLL1-208ENST00000508459 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 WTAPQ15007 396 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 TMEM67Q5HYA8 995 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 TMEM179Q6ZVK1 233 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 NEDD1Q8NHV4 660 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 ZNF274Q96GC6 653 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 ZSCAN10Q96SZ4 725 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 KANSL2Q9H9L4 492 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 NEDD4P46934 1319 aa16.92■□□□□ 0.3
HMGCLL1-208ENST00000508459 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 ASNSP08243 561 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 CACNB3P54284 484 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 TFAP4Q01664 338 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 IFIT1BQ5T764 474 aaKnown RBP16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 NFXL1Q6ZNB6 911 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 TRPM4Q8TD43 1214 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 NBPF3Q9H094 633 aa16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.91■□□□□ 0.3
HMGCLL1-208ENST00000508459 DDTLA6NHG4 134 aaPredicted RBP16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 CDKL5O76039 1030 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 RASA1P20936 1047 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 EVCP57679 992 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 Q6ZUG5 572 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 CATIPQ7Z7H3 387 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 IPO9Q96P70 1041 aaKnown RBP16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
HMGCLL1-208ENST00000508459 CYP2D7A0A087X1C5 515 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 CTNND1O60716 968 aaKnown RBP16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 DDAH1O94760 285 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 CYP2D6P10635 497 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 KIF5BP33176 963 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 PCDHAC2Q9Y5I4 1007 aa16.89■□□□□ 0.29
HMGCLL1-208ENST00000508459 SH2B2O14492 632 aaPredicted RBP16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 TTLL1O95922 423 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 GNAQP50148 359 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 AK2P54819 239 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 FKBP1BP68106 108 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 SLKQ9H2G2 1235 aaPredicted RBP16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 CLEC11AQ9Y240 323 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 TNKSO95271 1327 aa16.88■□□□□ 0.29
HMGCLL1-208ENST00000508459 SHTN1A0MZ66 631 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 EGFRP00533 1210 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 TOP1P11387 765 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 SHMT1P34896 483 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 IGDCC4Q8TDY8 1250 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 BRF1Q92994 677 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 DYNLL2Q96FJ2 89 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 LLPHQ9BRT6 129 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 AS3MTQ9HBK9 375 aa16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 RBM28Q9NW13 759 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-208ENST00000508459 MPHOSPH10O00566 681 aaKnown RBP16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 ZBTB43O43298 467 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 PRDM1O75626 825 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 RCSD1Q6JBY9 416 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 SH3BP5LQ7L8J4 393 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 ARMC9Q7Z3E5 817 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 TEPSINQ96N21 525 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 PICK1Q9NRD5 415 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 NYAP2Q9P242 653 aa16.86■□□□□ 0.29
HMGCLL1-208ENST00000508459 CPLX1O14810 134 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 CAP2P40123 477 aa16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 HMGN5P82970 282 aaKnown RBP16.85■□□□□ 0.29
HMGCLL1-208ENST00000508459 ZFPM1Q8IX07 1006 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms