RNA–Protein interactions for RNA: ENST00000508284.5

SQSTM1-212, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-212ENST00000508284 DNAJC18Q9H819 358 aa21.78■■□□□ 1.08
SQSTM1-212ENST00000508284 PHIPQ8WWQ0 1821 aa21.78■■□□□ 1.08
SQSTM1-212ENST00000508284 MYPNQ86TC9 1320 aa21.78■■□□□ 1.08
SQSTM1-212ENST00000508284 MAGEB6P1A0A0J9YX57 407 aa21.77■■□□□ 1.08
SQSTM1-212ENST00000508284 GINM1Q9NU53 330 aa21.77■■□□□ 1.08
SQSTM1-212ENST00000508284 KIAA0100Q14667 2235 aaKnown RBP21.77■■□□□ 1.08
SQSTM1-212ENST00000508284 PDE6AP16499 860 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 EN2P19622 333 aaPredicted RBP21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 TTC6Q86TZ1 520 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 ANKRD13CQ8N6S4 541 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 WDR18Q9BV38 432 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 BOLA2Q9H3K6 86 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 TMOD4Q9NZQ9 345 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 PTPRFP10586 1907 aa21.76■■□□□ 1.07
SQSTM1-212ENST00000508284 MTMR2Q13614 643 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 SH3D19Q5HYK7 790 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 BIN2Q9UBW5 565 aaPredicted RBP21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 FOCADQ5VW36 1801 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 ATAD5Q96QE3 1844 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 CDK5RAP2Q96SN8 1893 aa21.75■■□□□ 1.07
SQSTM1-212ENST00000508284 TNPO2O14787 897 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 POLR3DP05423 398 aaPredicted RBP21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 GRK4P32298 578 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 BACE1P56817 501 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 JAG1P78504 1218 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 PRKCZQ05513 592 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 CRNKL1Q9BZJ0 848 aaKnown RBP21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 PAG1Q9NWQ8 432 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 ZBTB21Q9ULJ3 1066 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 ZNF532Q9HCE3 1301 aa21.74■■□□□ 1.07
SQSTM1-212ENST00000508284 SIPA1L1O43166 1804 aa21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 C19orf81C9J6K1 198 aa21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 USP17L10C9JJH3 530 aa21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 ATP5JP18859 108 aa21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 EDC3Q96F86 508 aaKnown RBP21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 EHD4Q9H223 541 aa21.73■■□□□ 1.07
SQSTM1-212ENST00000508284 GH2P01242 217 aa21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 GCLCP48506 637 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 IRX3P78415 501 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 FAM110CQ1W6H9 321 aa21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 PRPF38BQ5VTL8 546 aaKnown RBP21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 ASCC2Q9H1I8 757 aaPredicted RBP21.72■■□□□ 1.07
SQSTM1-212ENST00000508284 MYH1P12882 1939 aa21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 SMARCA5O60264 1052 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 CERKLQ49MI3 558 aaPredicted RBP21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 TATDN1Q6P1N9 297 aa21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 COA7Q96BR5 231 aa21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 MCM9Q9NXL9 1143 aa21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 GABRQQ9UN88 632 aa21.71■■□□□ 1.07
SQSTM1-212ENST00000508284 UBXN2AP68543 259 aa21.7■■□□□ 1.06
SQSTM1-212ENST00000508284 SLAIN1Q8ND83 568 aa21.7■■□□□ 1.06
SQSTM1-212ENST00000508284 HAUS7Q99871 368 aa21.7■■□□□ 1.06
SQSTM1-212ENST00000508284 CABP5Q9NP86 173 aa21.7■■□□□ 1.06
SQSTM1-212ENST00000508284 TAOK2Q9UL54 1235 aa21.7■■□□□ 1.06
SQSTM1-212ENST00000508284 TCRBV5S4A2TA0A5A2 114 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 FLT3LGP49771 235 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 PLCD1P51178 756 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 NUCB1Q02818 461 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 RAB3GAP1Q15042 981 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 MTFR1Q15390 333 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 ABCB5Q2M3G0 1257 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 FEZ1Q99689 392 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 LOC285556D6RIA3 1793 aa21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 RBBP6Q7Z6E9 1792 aaKnown RBP21.69■■□□□ 1.06
SQSTM1-212ENST00000508284 BRCA2P51587 3418 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 ADCY3O60266 1144 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 ADD2P35612 726 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 LCORLQ8N3X6 602 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 SDR42E1Q8WUS8 393 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 ARMT1Q9H993 441 aa21.68■■□□□ 1.06
SQSTM1-212ENST00000508284 HOXA7P31268 230 aaPredicted RBP21.67■■□□□ 1.06
SQSTM1-212ENST00000508284 ZYXQ15942 572 aaKnown RBP21.67■■□□□ 1.06
SQSTM1-212ENST00000508284 MGAMO43451 1857 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 MBD4O95243 580 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 ZSCAN25Q6NSZ9 544 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 NKX2-3Q8TAU0 364 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 GPATCH3Q96I76 525 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 P2RX7Q99572 595 aaKnown RBP21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 RNF208Q9H0X6 261 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 DCP1AQ9NPI6 582 aaPredicted RBP21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 EMILIN3Q9NT22 766 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 ECHDC1Q9NTX5 307 aa21.66■■□□□ 1.06
SQSTM1-212ENST00000508284 MPHOSPH10O00566 681 aaKnown RBP21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 CCL5P13501 91 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 SHMT1P34896 483 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 HERVK_113P62684 666 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 IRF5Q13568 498 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 SLFNL1Q499Z3 407 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 CHD1LQ86WJ1 897 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 PXYLP1Q8TE99 480 aa21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 MKI67P46013 3256 aaKnown RBP21.65■■□□□ 1.06
SQSTM1-212ENST00000508284 ELNP15502 786 aa21.64■■□□□ 1.05
SQSTM1-212ENST00000508284 USP14P54578 494 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms