RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NUTM2GQ5VZR2 741 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 ISM2Q6H9L7 571 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 UHMK1Q8TAS1 419 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 TNIP3Q96KP6 325 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 ARHGAP28Q9P2N2 729 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 A0A1B0GVC2 190 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 MPHOSPH10O00566 681 aaKnown RBP8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 IL33O95760 270 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 ORC1Q13415 861 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 GBX1Q14549 363 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 SLAIN1Q8ND83 568 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 MGARPQ8TDB4 240 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 BAP1Q92560 729 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 OSBPL7Q9BZF2 842 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 TBC1D22BQ9NU19 505 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 TRHDEQ9UKU6 1024 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 MAPRE3Q9UPY8 281 aa8.72□□□□□ -1.01
PDGFRA-206ENST00000508170 USP46P62068 366 aa8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 CACNB2Q08289 660 aaPredicted RBP8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 CCDC81Q6ZN84 652 aa8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 FAM186BQ8IYM0 893 aa8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 CSRNP1Q96S65 589 aa8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 TARS2Q9BW92 718 aaKnown RBP8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 UTP6Q9NYH9 597 aaKnown RBP8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 DDX20Q9UHI6 824 aaKnown RBP8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 TNKSO95271 1327 aa8.71□□□□□ -1.02
PDGFRA-206ENST00000508170 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 CLCN6P51797 869 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 MPP1Q00013 466 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 G3BP1Q13283 466 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 MINDY4Q4G0A6 757 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 CCDC94Q9BW85 323 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 LUC7LQ9NQ29 371 aaKnown RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 CGNQ9P2M7 1197 aaKnown RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 GIMAP2Q9UG22 337 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 GPR52Q9Y2T5 361 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 AKR1B10O60218 316 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 SH3BGRP55822 239 aaPredicted RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 CCT6BQ92526 530 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 JAKMIP2Q96AA8 810 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 CEP72Q9P209 647 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 LRRFIP2Q9Y608 721 aaKnown RBP8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 ABCC8Q09428 1581 aa8.7□□□□□ -1.02
PDGFRA-206ENST00000508170 ESPNB1AK53 854 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 MRE11P49959 708 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 SSRP1Q08945 709 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 SPATA1Q5VX52 437 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 FAAH2Q6GMR7 532 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 GALNT17Q6IS24 598 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ILDR1Q86SU0 546 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ATCAYQ86WG3 371 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 GJD3Q8N144 294 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 RDH13Q8NBN7 331 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 NUDT16L1Q9BRJ7 211 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ATP6V0A4Q9HBG4 840 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 SERTM1A2A2V5 107 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 FAM25EA8MYX2 175 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 PYGLP06737 847 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ABCD1P33897 745 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 GABREP78334 506 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 COX10Q12887 443 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 STRN3Q13033 797 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 FASTKD5Q7L8L6 764 aaKnown RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 UROC1Q96N76 676 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 SLC13A1Q9BZW2 595 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 OSGEPQ9NPF4 335 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ZNF112Q9UJU3 913 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 ZBTB21Q9ULJ3 1066 aa8.69□□□□□ -1.02
PDGFRA-206ENST00000508170 FRMPD2Q68DX3 1309 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 PEG3Q9GZU2 1588 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 RTCAO00442 366 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 BBOX1O75936 387 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 GRK2P25098 689 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 MECOMQ03112 1051 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 NUGGCQ68CJ6 796 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 CYB5RLQ6IPT4 315 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 PI16Q6UXB8 463 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 LILRB1Q8NHL6 650 aaPredicted RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 NSUN6Q8TEA1 469 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 BARD1Q99728 777 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 PDP2Q9P2J9 529 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 EIF1AYO14602 144 aaKnown RBP8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 TMEM127O75204 238 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 MAP3K6O95382 1288 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 SLC9A5Q14940 896 aa8.68□□□□□ -1.02
PDGFRA-206ENST00000508170 GABPB2Q8TAK5 448 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms