RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 IQCA1Q86XH1 822 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 IDI2Q9BXS1 227 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 CNNM2Q9H8M5 875 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
PROM1-207ENST00000508167 ALX1Q15699 326 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 CDC37L1Q7L3B6 337 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 AGXT2Q9BYV1 514 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
PROM1-207ENST00000508167 FAM47AQ5JRC9 791 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 C12orf60Q5U649 245 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
PROM1-207ENST00000508167 GLIS2Q9BZE0 524 aaPredicted RBP12.91□□□□□ -0.34
PROM1-207ENST00000508167 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
PROM1-207ENST00000508167 MYH2Q9UKX2 1941 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 E7EWF7 191 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 ZNF445P59923 1031 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 FOXP4Q8IVH2 680 aaPredicted RBP12.9□□□□□ -0.34
PROM1-207ENST00000508167 ZKSCAN3Q9BRR0 538 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 STX8Q9UNK0 236 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 LIMCH1Q9UPQ0 1083 aa12.9□□□□□ -0.34
PROM1-207ENST00000508167 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.35
PROM1-207ENST00000508167 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.35
PROM1-207ENST00000508167 FAM83AQ86UY5 434 aa12.9□□□□□ -0.35
PROM1-207ENST00000508167 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.35
PROM1-207ENST00000508167 RPS6KB1P23443 525 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 NBPF12Q5TAG4 269 aaPredicted RBP12.89□□□□□ -0.35
PROM1-207ENST00000508167 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 HMGB1P09429 215 aaKnown RBP12.89□□□□□ -0.35
PROM1-207ENST00000508167 MCM5P33992 734 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 CDK8P49336 464 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 TFAP4Q01664 338 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 CERKLQ49MI3 558 aaPredicted RBP12.89□□□□□ -0.35
PROM1-207ENST00000508167 TBC1D10CQ8IV04 446 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 POTEJP0CG39 1038 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 FKBP1CQ5VVH2 108 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 MAST2Q6P0Q8 1798 aa12.89□□□□□ -0.35
PROM1-207ENST00000508167 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 GDF11O95390 407 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
PROM1-207ENST00000508167 ZC3H15Q8WU90 426 aaKnown RBP12.88□□□□□ -0.35
PROM1-207ENST00000508167 SLURP2P0DP57 97 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 SBK1Q52WX2 424 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
PROM1-207ENST00000508167 SYT1P21579 422 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 DLK2Q6UY11 383 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
PROM1-207ENST00000508167 PRC1O43663 620 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 EXOSC10Q01780 885 aaKnown RBP12.87□□□□□ -0.35
PROM1-207ENST00000508167 EVX2Q03828 476 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 FEZ1Q99689 392 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
PROM1-207ENST00000508167 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 LAMB1P07942 1786 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 GADD45BO75293 160 aaPredicted RBP12.87□□□□□ -0.35
PROM1-207ENST00000508167 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
PROM1-207ENST00000508167 ZSCAN23Q3MJ62 389 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 CDAN1Q8IWY9 1227 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 PICK1Q9NRD5 415 aa12.87□□□□□ -0.35
PROM1-207ENST00000508167 GRM1Q13255 1194 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 ABCB5Q2M3G0 1257 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
PROM1-207ENST00000508167 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 WRNIP1Q96S55 665 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 HERC5Q9UII4 1024 aaKnown RBP12.86□□□□□ -0.35
PROM1-207ENST00000508167 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
PROM1-207ENST00000508167 FZD1Q9UP38 647 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 CSADQ9Y600 493 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
PROM1-207ENST00000508167 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 STAG1Q8WVM7 1258 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 ZBED3Q96IU2 234 aaPredicted RBP12.85□□□□□ -0.35
PROM1-207ENST00000508167 ZNF341Q9BYN7 854 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 NEDD4P46934 1319 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 SBF1O95248 1867 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 CDK5RAP2Q96SN8 1893 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 CTDNEP1O95476 244 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 WTAPQ15007 396 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 ARMC9Q7Z3E5 817 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 PPP2R3BQ9Y5P8 575 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 TRAF5O00463 557 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 PCP11498 1178 aaKnown RBP12.85□□□□□ -0.35
PROM1-207ENST00000508167 STK3Q13188 491 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
PROM1-207ENST00000508167 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 BRF1Q92994 677 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 CDCA5Q96FF9 252 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 CCDC17Q96LX7 622 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 ZSWIM5Q9P217 1185 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 NPM3O75607 178 aaKnown RBP12.85□□□□□ -0.35
PROM1-207ENST00000508167 GH2P01242 217 aa12.85□□□□□ -0.35
PROM1-207ENST00000508167 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
PROM1-207ENST00000508167 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms