RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 GTF2F1P35269 517 aaKnown RBP eCLIP13.31□□□□□ -0.282e-8■■■■■ 40.5
SMG7-212ENST00000507469 LONRF3Q496Y0 759 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 TPTE2Q6XPS3 522 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 FAM114A1Q8IWE2 563 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 ANKRD2Q9GZV1 360 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 VPS16Q9H269 839 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 WDR19Q8NEZ3 1342 aa13.31□□□□□ -0.28
SMG7-212ENST00000507469 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 USP17L21D6R901 530 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 MMP1P03956 469 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 CEP112Q8N8E3 955 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 PLIN2Q99541 437 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
SMG7-212ENST00000507469 FAM193AP78312 1265 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 PTPN21Q16825 1174 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 MAPK8IP1Q9UQF2 711 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 NAPAP54920 295 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 NR5A1Q13285 461 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 TRIML1Q8N9V2 468 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 KDM6AO15550 1401 aaPredicted RBP13.3□□□□□ -0.28
SMG7-212ENST00000507469 FDPSP14324 419 aaKnown RBP13.3□□□□□ -0.28
SMG7-212ENST00000507469 CACNA2D4Q7Z3S7 1137 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 TFCP2L1Q9NZI6 479 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 PPP2R2CQ9Y2T4 447 aa13.3□□□□□ -0.28
SMG7-212ENST00000507469 SNAP23O00161 211 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
SMG7-212ENST00000507469 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
SMG7-212ENST00000507469 FGFR1OPO95684 399 aaKnown RBP13.29□□□□□ -0.28
SMG7-212ENST00000507469 GOLGA8FQ08AF8 430 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 GOLGA8DPQ0D2H9 430 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 NEDD4P46934 1319 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 LDHBP07195 334 aaKnown RBP13.29□□□□□ -0.28
SMG7-212ENST00000507469 CDC27P30260 824 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 ASIC1P78348 528 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 SYCP1Q15431 976 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 FAM47AQ5JRC9 791 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 SLF2Q8IX21 1173 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 TSG101Q99816 390 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 RFC4P35249 363 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 MCM6Q14566 821 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 MAP9Q49MG5 647 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 CSRNP2Q9H175 543 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 CDHR2Q9BYE9 1310 aa13.29□□□□□ -0.28
SMG7-212ENST00000507469 USP27XA6NNY8 438 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 NCBP1Q09161 790 aaKnown RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 SKIDA1Q1XH10 827 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 BLZF1Q9H2G9 400 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 CALCOCO1Q9P1Z2 691 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 LUC7L2Q9Y383 392 aaKnown RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 MEGF6O75095 1541 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 ABCC12Q96J65 1359 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 MCM3P25205 808 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 PAK1Q13153 545 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 GRAMD1CQ8IYS0 662 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 BPIFA3Q9BQP9 254 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 DESI2Q9BSY9 194 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 CYLC1P35663 651 aaPredicted RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 PLCD1P51178 756 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
SMG7-212ENST00000507469 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 CRACR2BQ8N4Y2 399 aaPredicted RBP13.28□□□□□ -0.28
SMG7-212ENST00000507469 CCDC96Q2M329 555 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 EHBP1Q8NDI1 1231 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 RNF26Q9BY78 433 aaPredicted RBP13.27□□□□□ -0.28
SMG7-212ENST00000507469 MAN1B1Q9UKM7 699 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 COL9A3Q14050 684 aaPredicted RBP13.27□□□□□ -0.28
SMG7-212ENST00000507469 SUSD4Q5VX71 490 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 ZSCAN29Q8IWY8 852 aaPredicted RBP13.27□□□□□ -0.28
SMG7-212ENST00000507469 OSBPL5Q9H0X9 879 aaPredicted RBP13.27□□□□□ -0.28
SMG7-212ENST00000507469 LY9Q9HBG7 655 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 C6orf50Q9HD87 102 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 JADE2Q9NQC1 790 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.28
SMG7-212ENST00000507469 ANTXR2P58335 489 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.29
SMG7-212ENST00000507469 CASP7P55210 303 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 SIK1P57059 783 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 ENGASEQ8NFI3 743 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
SMG7-212ENST00000507469 CEP89Q96ST8 783 aa13.27□□□□□ -0.29
SMG7-212ENST00000507469 PIK3C2AO00443 1686 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms