RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ROBO1Q9Y6N7 1651 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 MCM7P33993 719 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 FOXO4P98177 505 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 ADD2P35612 726 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
NEK1-203ENST00000507142 SPP2Q13103 211 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 KRT79Q5XKE5 535 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 GCOM1H8Y6P7 765 aaPredicted RBP10.78□□□□□ -0.68
NEK1-203ENST00000507142 POLR2MP0CAP2 368 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 MCAMP43121 646 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
NEK1-203ENST00000507142 CAMTA1Q9Y6Y1 1673 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 POTEB2H3BUK9 544 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 ANAPC15P60006 121 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 MAP1SQ66K74 1059 aaPredicted RBP10.77□□□□□ -0.68
NEK1-203ENST00000507142 KCTD1Q719H9 257 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 UIMC1Q96RL1 719 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 USP32Q8NFA0 1604 aa10.77□□□□□ -0.68
NEK1-203ENST00000507142 ZEB2O60315 1214 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 A0A0D9SFI3 127 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 hCG_1642624A0A1W2PR95 340 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 BMP3P12645 472 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 CPA1P15085 419 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 DDR1Q08345 913 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 FASTKD5Q7L8L6 764 aaKnown RBP10.77□□□□□ -0.69
NEK1-203ENST00000507142 TTC16Q8NEE8 873 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 AGBL3Q8NEM8 1001 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 UBN2Q6ZU65 1347 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 MYO5BQ9ULV0 1848 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 BMP15O95972 392 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 MBD3O95983 291 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 HSPD1P10809 573 aaKnown RBP10.77□□□□□ -0.69
NEK1-203ENST00000507142 SREBF2Q12772 1141 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 FAM212AQ96EL1 285 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 CAMKK2Q96RR4 588 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 PLA2G12BQ9BX93 195 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
NEK1-203ENST00000507142 PXDNQ92626 1479 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 MROH7-TTC4A0A0A0MT08 1334 aa10.77□□□□□ -0.69
NEK1-203ENST00000507142 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.69
NEK1-203ENST00000507142 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
NEK1-203ENST00000507142 SIGLEC1Q9BZZ2 1709 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 SGSM2O43147 1006 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 FGAP02671 866 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 KLHL10Q6JEL2 608 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 ADD3Q9UEY8 706 aaKnown RBP10.76□□□□□ -0.69
NEK1-203ENST00000507142 E7EWF7 191 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 LPXNO60711 386 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 DESP17661 470 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 CNNM3Q8NE01 707 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 KDM6AO15550 1401 aaPredicted RBP10.76□□□□□ -0.69
NEK1-203ENST00000507142 TNKSO95271 1327 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 CEMIPQ8WUJ3 1361 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 CYP2D7A0A087X1C5 515 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 KLRF2D3W0D1 207 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 DEXIO95424 95 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 DKC1O60832 514 aaKnown RBP eCLIP10.76□□□□□ -0.69
NEK1-203ENST00000507142 TMEM179Q6ZVK1 233 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 SMC1BQ8NDV3 1235 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 TRPC6Q9Y210 931 aa10.76□□□□□ -0.69
NEK1-203ENST00000507142 UBE2Q2LH0YL09 131 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 TNPO2O14787 897 aaKnown RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 ARID4AP29374 1257 aaPredicted RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 CDK8P49336 464 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 UTP14CQ5TAP6 766 aaKnown RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 SCAND2PQ9GZW5 306 aaPredicted RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 SUGT1Q9Y2Z0 365 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 M0R2C6 588 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 RPS6KB1P23443 525 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 STAT2P52630 851 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 AK2P54819 239 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 APBB1IPQ7Z5R6 666 aaPredicted RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 MKRN1Q9UHC7 482 aaKnown RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 ARHGEF28Q8N1W1 1705 aaKnown RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 FAM13AO94988 1023 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 SERPINC1P01008 464 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 SNAPC2Q13487 334 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 CAVIN1Q6NZI2 390 aaKnown RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 EEPD1Q7L9B9 569 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 HOXC10Q9NYD6 342 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 LETM1O95202 739 aaPredicted RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 STAT6P42226 847 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 DNM2P50570 870 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
NEK1-203ENST00000507142 GBA2Q9HCG7 927 aaPredicted RBP10.75□□□□□ -0.69
NEK1-203ENST00000507142 CCNT1O60563 726 aaKnown RBP10.74□□□□□ -0.69
NEK1-203ENST00000507142 SLC16A2P36021 539 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 CXCL9Q07325 125 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 TCERG1LQ5VWI1 586 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 USP17L2Q6R6M4 530 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 STX6O43752 255 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 PIK3AP1Q6ZUJ8 805 aa10.74□□□□□ -0.69
NEK1-203ENST00000507142 PUS7LQ9H0K6 701 aaKnown RBP10.74□□□□□ -0.69
NEK1-203ENST00000507142 PSTPIP2Q9H939 334 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms