RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 PTPRAP18433 802 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 CDK8P49336 464 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 PPIL2Q13356 520 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 CASC1Q6TDU7 716 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 DYNLL2Q96FJ2 89 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 ZNF287Q9HBT7 754 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 PICK1Q9NRD5 415 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 KCNH4Q9UQ05 1017 aa11.59□□□□□ -0.55
SFXN1-205ENST00000506963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
SFXN1-205ENST00000506963 PTPRFP10586 1907 aa11.58□□□□□ -0.55
SFXN1-205ENST00000506963 TESPA1A2RU30 521 aaPredicted RBP11.58□□□□□ -0.56
SFXN1-205ENST00000506963 MINDY4BA8MYZ0 360 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 CXCL11O14625 94 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 ORC4O43929 436 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
SFXN1-205ENST00000506963 GJA5P36382 358 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 JAG1P78504 1218 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 SLC4A8Q2Y0W8 1093 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
SFXN1-205ENST00000506963 SLC44A5Q8NCS7 719 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 MAP4K1Q92918 833 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 OPTNQ96CV9 577 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 ZBTB21Q9ULJ3 1066 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
SFXN1-205ENST00000506963 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
SFXN1-205ENST00000506963 USP17L5A8MUK1 530 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 IRF6O14896 467 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 EPB41L2O43491 1005 aaKnown RBP11.57□□□□□ -0.56
SFXN1-205ENST00000506963 RASA1P20936 1047 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 GUCY1A2P33402 732 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 TM4SF4P48230 202 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 INHBEP58166 350 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 PDE4BQ07343 736 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
SFXN1-205ENST00000506963 CNKSR2Q8WXI2 1034 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 MS4A4AQ96JQ5 239 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 LSG1Q9H089 658 aaKnown RBP11.57□□□□□ -0.56
SFXN1-205ENST00000506963 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
SFXN1-205ENST00000506963 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
SFXN1-205ENST00000506963 PLIN4Q96Q06 1357 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 GH2P01242 217 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 GTF2A2P52657 109 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 KIF23Q02241 960 aaPredicted RBP11.56□□□□□ -0.56
SFXN1-205ENST00000506963 PTH1RQ03431 593 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 KIAA1211Q6ZU35 1233 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 TMEM179Q6ZVK1 233 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 STAG1Q8WVM7 1258 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 NBPF3Q9H094 633 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 CABP5Q9NP86 173 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 ZHX2Q9Y6X8 837 aa11.56□□□□□ -0.56
SFXN1-205ENST00000506963 IGKV6D-41A0A0C4DH26 115 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 ZNF213O14771 459 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 AOC2O75106 756 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 GDF11O95390 407 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 CETPP11597 493 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 AKR1B1P15121 316 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 SREBF2Q12772 1141 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 SNAPC2Q13487 334 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 IMMTQ16891 758 aaKnown RBP11.55□□□□□ -0.56
SFXN1-205ENST00000506963 SH3D19Q5HYK7 790 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 AKNAD1Q5T1N1 836 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
SFXN1-205ENST00000506963 RNF41Q9H4P4 317 aaPredicted RBP11.55□□□□□ -0.56
SFXN1-205ENST00000506963 MKNK2Q9HBH9 465 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
SFXN1-205ENST00000506963 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 A0A0G2JLL6 359 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 C19orf81C9J6K1 198 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 CYP21A2P08686 494 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 NOVP48745 357 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 MAP2K1Q02750 393 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 CTDSPL2Q05D32 466 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 MOGSQ13724 837 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 SEPT2Q15019 361 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 SHROOM1Q2M3G4 852 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 PRRT2Q7Z6L0 340 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 ZNF444Q8N0Y2 327 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 KANSL2Q9H9L4 492 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
SFXN1-205ENST00000506963 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
SFXN1-205ENST00000506963 REC8O95072 547 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 BACE1P56817 501 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 HAND2P61296 217 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 SPP2Q13103 211 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
SFXN1-205ENST00000506963 SIAH1Q8IUQ4 282 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms