RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SSTR3P32745 418 aaPredicted RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 NBL1P41271 181 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 ADCYAP1R1P41586 468 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 GCLCP48506 637 aaPredicted RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 VCPP55072 806 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 ST3GAL2Q16842 350 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 HERC4Q5GLZ8 1057 aaPredicted RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 DCAF15Q66K64 600 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 PPP2R2DQ66LE6 453 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 MFSD5Q6N075 450 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 APOBEC3HQ6NTF7 200 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 ANKRD33Q7Z3H0 272 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 SPRED2Q7Z698 418 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 TRMT44Q8IYL2 757 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 TTLL11Q8NHH1 800 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 RTF1Q92541 710 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 FERMT2Q96AC1 680 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 APBA2Q99767 749 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 PRRX2Q99811 253 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 FSD1Q9BTV5 496 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 PORCNQ9H237 461 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 GREM2Q9H772 168 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 SPINK5Q9NQ38 1064 aaPredicted RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 PHF24Q9UPV7 400 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 ZHX2Q9Y6X8 837 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 COL11A1P12107 1806 aaPredicted RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 MYBBP1AQ9BQG0 1328 aaKnown RBP4.43□□□□□ -1.7
TCOF1-208ENST00000506063 FANCMQ8IYD8 2048 aa4.43□□□□□ -1.7
TCOF1-208ENST00000506063 MSCO60682 206 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 PCCAP05165 728 aaPredicted RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 ACRP10323 421 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 IRS1P35568 1242 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 CTSWP56202 376 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 GRB10Q13322 594 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 LRRC41Q15345 812 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 Q3C1V9 767 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 MFSD14BQ5SR56 506 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 DGLUCYQ7Z3D6 616 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 CCDC84Q86UT8 332 aaPredicted RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 SCYL3Q8IZE3 742 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 SLC44A5Q8NCS7 719 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 PNISRQ8TF01 805 aaKnown RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 TOX2Q96NM4 488 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 CDC5LQ99459 802 aaKnown RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 UBE2ZQ9H832 354 aaPredicted RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 MUTYHQ9UIF7 546 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 PCDHA11Q9Y5I1 949 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 MYH13Q9UKX3 1938 aa4.42□□□□□ -1.7
TCOF1-208ENST00000506063 SMG1Q96Q15 3661 aaKnown RBP4.42□□□□□ -1.7
TCOF1-208ENST00000506063 BPTFQ12830 3046 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 TRIM75PA6NK02 468 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 H0Y858 1186 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 GTPBP6O43824 516 aaPredicted RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 PQBP1O60828 265 aaKnown RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 HOXC6P09630 235 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 RGS2P41220 211 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 MAP3K10Q02779 954 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 TAP1Q03518 808 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 CHRNDQ07001 517 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 NFIAQ12857 509 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 PPIGQ13427 754 aaKnown RBP eCLIP4.41□□□□□ -1.71e-7■■■■□ 22.3
TCOF1-208ENST00000506063 ANO1Q5XXA6 986 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 PTCRAQ6ISU1 281 aaPredicted RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 GPR142Q7Z601 462 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 ZFPM1Q8IX07 1006 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 ADSSL1Q8N142 457 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 PROCA1Q8NCQ7 364 aaPredicted RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 ARRDC4Q8NCT1 418 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 TDRD7Q8NHU6 1098 aaKnown RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 NPLOC4Q8TAT6 608 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 NEK9Q8TD19 979 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 EDAQ92838 391 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 ATOH1Q92858 354 aaPredicted RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 HOOK2Q96ED9 719 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 ZDHHC15Q96MV8 337 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 CERS4Q9HA82 394 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 TLR9Q9NR96 1032 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 TMEM39AQ9NV64 488 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 DLL3Q9NYJ7 618 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 CHPF2Q9P2E5 772 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 RBPJLQ9UBG7 517 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 DBF4Q9UBU7 674 aaPredicted RBP4.41□□□□□ -1.7
TCOF1-208ENST00000506063 SIPA1L1O43166 1804 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 MYO10Q9HD67 2058 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 WDFY3Q8IZQ1 3526 aa4.41□□□□□ -1.7
TCOF1-208ENST00000506063 HELZ2Q9BYK8 2649 aaKnown RBP4.4□□□□□ -1.7
TCOF1-208ENST00000506063 A0A1W2PQ45 241 aaPredicted RBP4.4□□□□□ -1.71
TCOF1-208ENST00000506063 A0A1W2PQY0 241 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 TMEM221A6NGB7 291 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 KBTBD13C9JR72 458 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 M0R296 226 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 CA3P07451 260 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 KCNA5P22460 613 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 CYP2C19P33261 490 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 HDLBPQ00341 1268 aaKnown RBP4.4□□□□□ -1.71
TCOF1-208ENST00000506063 MAP2K5Q13163 448 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 KRT24Q2M2I5 525 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 FAM47AQ5JRC9 791 aa4.4□□□□□ -1.71
TCOF1-208ENST00000506063 PSRC1Q6PGN9 363 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms