RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 LRRC3Q9BY71 257 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 SSU72Q9NP77 194 aaKnown RBP6.53□□□□□ -1.36
CHD1-203ENST00000505657 IGSF5Q9NSI5 407 aa6.53□□□□□ -1.36
CHD1-203ENST00000505657 LEFTY1O75610 366 aa6.52□□□□□ -1.37
CHD1-203ENST00000505657 TCF3P15923 654 aa6.52□□□□□ -1.37
CHD1-203ENST00000505657 SLBPQ14493 270 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD1-203ENST00000505657 ZNF507Q8TCN5 953 aa6.52□□□□□ -1.37
CHD1-203ENST00000505657 BRMS1Q9HCU9 246 aa6.52□□□□□ -1.37
CHD1-203ENST00000505657 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 DNAJA2O60884 412 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 PGRP06401 933 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
CHD1-203ENST00000505657 ARMCX6Q7L4S7 300 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 TOP6BLQ8N6T0 577 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 ACSF2Q96CM8 615 aaPredicted RBP6.51□□□□□ -1.37
CHD1-203ENST00000505657 DPH2Q9BQC3 489 aaPredicted RBP6.51□□□□□ -1.37
CHD1-203ENST00000505657 TJP2Q9UDY2 1190 aa6.51□□□□□ -1.37
CHD1-203ENST00000505657 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.51□□□□□ -1.37
CHD1-203ENST00000505657 E9PSI1 815 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 JAG1P78504 1218 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 APOBRQ0VD83 1088 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 SEZ6Q53EL9 994 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 ZNF765Q7L2R6 523 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 CDC37L1Q7L3B6 337 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 NT5C1AQ9BXI3 368 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 ACBD3Q9H3P7 528 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 TACC3Q9Y6A5 838 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 U3KQE9 123 aa6.5□□□□□ -1.37
CHD1-203ENST00000505657 HTR3BO95264 441 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 PLCG1P19174 1290 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 TNNI2P48788 182 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 PAK2Q13177 524 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
CHD1-203ENST00000505657 PRAMEF13Q5VWM6 474 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 OGFOD2Q6N063 350 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 HID1Q8IV36 788 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 ABI1Q8IZP0 508 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 XAGE3Q8WTP9 111 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 DUSP23Q9BVJ7 150 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 REV1Q9UBZ9 1251 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 PRR36Q9H6K5 1346 aa6.49□□□□□ -1.37
CHD1-203ENST00000505657 ROBO2Q9HCK4 1378 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 UPK3BL1B0FP48 263 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 UPK3BL2E5RIL1 263 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 LRIG2O94898 1065 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 ERCC5P28715 1186 aaPredicted RBP6.48□□□□□ -1.37
CHD1-203ENST00000505657 CAP2P40123 477 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 CLCQ05315 142 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 OGFOD3Q6PK18 319 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 SLITRK4Q8IW52 837 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 KCT2Q8NC54 265 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 NKD1Q969G9 470 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 FOXQ1Q9C009 403 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 TGIF2Q9GZN2 237 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 PCDHB14Q9Y5E9 798 aa6.48□□□□□ -1.37
CHD1-203ENST00000505657 SLITRK5O94991 958 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 CST3P01034 146 aaPredicted RBP6.47□□□□□ -1.37
CHD1-203ENST00000505657 PDE4BQ07343 736 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 TMEM201Q5SNT2 666 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 GK5Q6ZS86 529 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 MRPL41Q8IXM3 137 aaKnown RBP6.47□□□□□ -1.37
CHD1-203ENST00000505657 RIN3Q8TB24 985 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 OSBPL1AQ9BXW6 950 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 PRDM10Q9NQV6 1147 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 ADAM30Q9UKF2 790 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 CNTNAP4Q9C0A0 1308 aa6.47□□□□□ -1.37
CHD1-203ENST00000505657 CHURC1-FNTBB4DL54 471 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 EOMESO95936 686 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 FAM214BQ7L5A3 538 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 MCATQ8IVS2 390 aaKnown RBP6.46□□□□□ -1.38
CHD1-203ENST00000505657 MIPEPQ99797 713 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 KLHL3Q9UH77 587 aa6.46□□□□□ -1.38
CHD1-203ENST00000505657 MCM4P33991 863 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 DIEXFQ68CQ4 756 aaKnown RBP6.45□□□□□ -1.38
CHD1-203ENST00000505657 SLC6A19Q695T7 634 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 FAM181AQ8N9Y4 354 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 FAM13CQ8NE31 585 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 GPRASP2Q96D09 838 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 HEXIM2Q96MH2 286 aaKnown RBP6.45□□□□□ -1.38
CHD1-203ENST00000505657 ANTXR1Q9H6X2 564 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 LRRC4CQ9HCJ2 640 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
CHD1-203ENST00000505657 ATE1O95260 518 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 C8AP07357 584 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 GJA8P48165 433 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 OVOS1Q6IE37 1185 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 KRTAP4-2Q9BYR5 136 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 EHMT1Q9H9B1 1298 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
CHD1-203ENST00000505657 SLC22A31A6NKX4 558 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
CHD1-203ENST00000505657 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms