RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 LAS1LQ9Y4W2 734 aaKnown RBP9□□□□□ -0.97
VCAN-206ENST00000505615 PHIPQ8WWQ0 1821 aa9□□□□□ -0.97
VCAN-206ENST00000505615 MAST2Q6P0Q8 1798 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 TAF5LO75529 589 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 KCNJ4P48050 445 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 FLT3LGP49771 235 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 PPATQ06203 517 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 IRF5Q13568 498 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 ZNF804AQ7Z570 1209 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 PLA2G12BQ9BX93 195 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 PCGF6Q9BYE7 350 aa8.99□□□□□ -0.97
VCAN-206ENST00000505615 UBE2OQ9C0C9 1292 aaKnown RBP8.99□□□□□ -0.97
VCAN-206ENST00000505615 RPAP1Q9BWH6 1393 aaPredicted RBP8.99□□□□□ -0.97
VCAN-206ENST00000505615 LTBP2Q14767 1821 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 FRMPD3Q5JV73 1810 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 H7C1W4 665 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 INPP5BP32019 993 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 CRKP46108 304 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 CASP7P55210 303 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 FOXC1Q12948 553 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 GPAT2Q6NUI2 795 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 UBE3BQ7Z3V4 1068 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 MPHOSPH8Q99549 860 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.98□□□□□ -0.97
VCAN-206ENST00000505615 MBIPQ9NS73 344 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 TTF2Q9UNY4 1162 aaKnown RBP8.98□□□□□ -0.97
VCAN-206ENST00000505615 MAP3K2Q9Y2U5 619 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 FCF1Q9Y324 198 aaKnown RBP8.98□□□□□ -0.97
VCAN-206ENST00000505615 PFASO15067 1338 aa8.98□□□□□ -0.97
VCAN-206ENST00000505615 DOCK2Q92608 1830 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 GPR37O15354 613 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 CSF1RP07333 972 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 CYP2C8P10632 490 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 TNNI2P48788 182 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 CACNB3P54284 484 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
VCAN-206ENST00000505615 NEUROD2Q15784 382 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 GRIK5Q16478 980 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 CWF19L2Q2TBE0 894 aaKnown RBP8.97□□□□□ -0.97
VCAN-206ENST00000505615 MFSD14BQ5SR56 506 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 TDRD7Q8NHU6 1098 aaKnown RBP8.97□□□□□ -0.97
VCAN-206ENST00000505615 FAM161BQ96MY7 647 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 PARK7Q99497 189 aaKnown RBP8.97□□□□□ -0.97
VCAN-206ENST00000505615 DACH1Q9UI36 760 aa8.97□□□□□ -0.97
VCAN-206ENST00000505615 CACNA1FO60840 1977 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 ZNF853P0CG23 659 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 PLA2G5P39877 138 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 FUT2Q10981 343 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 FAM160A2Q8N612 972 aaPredicted RBP8.96□□□□□ -0.98
VCAN-206ENST00000505615 MAFAQ8NHW3 353 aaPredicted RBP8.96□□□□□ -0.98
VCAN-206ENST00000505615 ZNF112Q9UJU3 913 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 DOCK1Q14185 1865 aa8.96□□□□□ -0.98
VCAN-206ENST00000505615 MYH13Q9UKX3 1938 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 PI4KAP2A4QPH2 592 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 DDX58O95786 925 aaKnown RBP8.95□□□□□ -0.98
VCAN-206ENST00000505615 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
VCAN-206ENST00000505615 NOL9Q5SY16 702 aaKnown RBP8.95□□□□□ -0.98
VCAN-206ENST00000505615 KSR2Q6VAB6 950 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 FAM83AQ86UY5 434 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 PI4KAP1Q8N8J0 262 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 CDX2Q99626 313 aaPredicted RBP8.95□□□□□ -0.98
VCAN-206ENST00000505615 ZNF341Q9BYN7 854 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 C11orf49Q9H6J7 331 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 SALL2Q9Y467 1007 aaPredicted RBP8.95□□□□□ -0.98
VCAN-206ENST00000505615 MUC6Q6W4X9 2439 aa8.95□□□□□ -0.98
VCAN-206ENST00000505615 LOC285556D6RIA3 1793 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 ELL2O00472 640 aaPredicted RBP8.94□□□□□ -0.98
VCAN-206ENST00000505615 TNPO2O14787 897 aaKnown RBP8.94□□□□□ -0.98
VCAN-206ENST00000505615 FECHP22830 423 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 MDM2Q00987 491 aaPredicted RBP8.94□□□□□ -0.98
VCAN-206ENST00000505615 TRIM32Q13049 653 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 FKBP1CQ5VVH2 108 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 DCAF15Q66K64 600 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 MIGA2Q7L4E1 593 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 CCDC146Q8IYE0 955 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 OGDHLQ9ULD0 1010 aa8.94□□□□□ -0.98
VCAN-206ENST00000505615 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 CXCL11O14625 94 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 HMGCRP04035 888 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 COL6A1P12109 1028 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 GYG1P46976 350 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 HDLBPQ00341 1268 aaKnown RBP8.93□□□□□ -0.98
VCAN-206ENST00000505615 GCKRQ14397 625 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 CTC1Q2NKJ3 1217 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 C8orf58Q8NAV2 365 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 HOOK2Q96ED9 719 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 PRDM9Q9NQV7 894 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 GMPR2Q9P2T1 348 aaKnown RBP8.93□□□□□ -0.98
VCAN-206ENST00000505615 SLC27A5Q9Y2P5 690 aa8.93□□□□□ -0.98
VCAN-206ENST00000505615 RLFQ13129 1914 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 ATRNL1Q5VV63 1379 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 A0A0G2JLL6 359 aaPredicted RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 CD2BP2O95400 341 aaKnown RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 NEXNQ0ZGT2 675 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 LRRC26Q2I0M4 334 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
VCAN-206ENST00000505615 APOBEC3HQ6NTF7 200 aaKnown RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 PRRT2Q7Z6L0 340 aaPredicted RBP8.92□□□□□ -0.98
VCAN-206ENST00000505615 RDH13Q8NBN7 331 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms