RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 COL4A5P29400 1685 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 RASA1P20936 1047 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 ADD1P35611 737 aaKnown RBP15.49■□□□□ 0.07
LMNA-220ENST00000504687 IARSP41252 1262 aaKnown RBP15.49■□□□□ 0.07
LMNA-220ENST00000504687 KRT85P78386 507 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 GSE1Q14687 1217 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 RCSD1Q6JBY9 416 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 CATIPQ7Z7H3 387 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 ZNF444Q8N0Y2 327 aaPredicted RBP15.49■□□□□ 0.07
LMNA-220ENST00000504687 FBXW7Q969H0 707 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 RNF26Q9BY78 433 aaPredicted RBP15.49■□□□□ 0.07
LMNA-220ENST00000504687 DHX36Q9H2U1 1008 aaKnown RBP15.49■□□□□ 0.07
LMNA-220ENST00000504687 KCNQ5Q9NR82 932 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
LMNA-220ENST00000504687 SIPA1L1O43166 1804 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 CDK8P49336 464 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 FOXD4L5Q5VV16 416 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 RSBN1LQ6PCB5 846 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 MTMR14Q8NCE2 650 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 NEDD1Q8NHV4 660 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 FOXD4L4Q8WXT5 416 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 ZKSCAN3Q9BRR0 538 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 MXD3Q9BW11 206 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 SCAND2PQ9GZW5 306 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 ISY1Q9ULR0 285 aaKnown RBP15.48■□□□□ 0.07
LMNA-220ENST00000504687 ZNRF3Q9ULT6 936 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 MYH6P13533 1939 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 ATRNL1Q5VV63 1379 aa15.48■□□□□ 0.07
LMNA-220ENST00000504687 PRDM1O75626 825 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 TFAP4Q01664 338 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 EVX2Q03828 476 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 SSRP1Q08945 709 aaKnown RBP15.47■□□□□ 0.07
LMNA-220ENST00000504687 FUT2Q10981 343 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 BRAPQ7Z569 592 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 METTL16Q86W50 562 aaKnown RBP15.47■□□□□ 0.07
LMNA-220ENST00000504687 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 LARGE2Q8N3Y3 721 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 CRACR2BQ8N4Y2 399 aaPredicted RBP15.47■□□□□ 0.07
LMNA-220ENST00000504687 AGBL3Q8NEM8 1001 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 C8orf76Q96K31 380 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
LMNA-220ENST00000504687 PPP1R1BQ9UD71 204 aaPredicted RBP15.47■□□□□ 0.07
LMNA-220ENST00000504687 DDX49Q9Y6V7 483 aaKnown RBP15.47■□□□□ 0.07
LMNA-220ENST00000504687 F8W031 263 aaPredicted RBP15.46■□□□□ 0.07
LMNA-220ENST00000504687 ENTPD3O75355 529 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 DEXIO95424 95 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 SCNN1DP51172 638 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 UBE2HP62256 183 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 DNM1Q05193 864 aaKnown RBP15.46■□□□□ 0.07
LMNA-220ENST00000504687 PPP4R3BQ5MIZ7 849 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 USP48Q86UV5 1035 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 KIAA0825Q8IV33 1275 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 FAM177A1Q8N128 213 aaPredicted RBP15.46■□□□□ 0.07
LMNA-220ENST00000504687 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
LMNA-220ENST00000504687 RBM27Q9P2N5 1060 aaKnown RBP15.46■□□□□ 0.07
LMNA-220ENST00000504687 CFAP45Q9UL16 551 aa15.46■□□□□ 0.07
LMNA-220ENST00000504687 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
LMNA-220ENST00000504687 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 TSPY3P0CV98 308 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 TSPY8P0CW00 308 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 KIF5BP33176 963 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 FAM47AQ5JRC9 791 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 FKBP1CQ5VVH2 108 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 NIM1KQ8IY84 436 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 STK11IPQ8N1F8 1099 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
LMNA-220ENST00000504687 TAOK3Q9H2K8 898 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 SAP30BPQ9UHR5 308 aaKnown RBP15.45■□□□□ 0.06
LMNA-220ENST00000504687 CNPY2Q9Y2B0 182 aa15.45■□□□□ 0.06
LMNA-220ENST00000504687 IGKV6D-41A0A0C4DH26 115 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
LMNA-220ENST00000504687 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 GNAQP50148 359 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 TMTC3Q6ZXV5 915 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 CCDC17Q96LX7 622 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 ZNF396Q96N95 335 aaPredicted RBP15.44■□□□□ 0.06
LMNA-220ENST00000504687 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 ZNF277Q9NRM2 450 aaPredicted RBP15.44■□□□□ 0.06
LMNA-220ENST00000504687 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 HDAC9Q9UKV0 1011 aa15.44■□□□□ 0.06
LMNA-220ENST00000504687 RXRAP19793 462 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.06
LMNA-220ENST00000504687 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 RAB11FIP4Q86YS3 637 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 FOXP4Q8IVH2 680 aaPredicted RBP15.43■□□□□ 0.06
LMNA-220ENST00000504687 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
LMNA-220ENST00000504687 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 KAT14Q9H8E8 782 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 PI4KBQ9UBF8 816 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
LMNA-220ENST00000504687 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms