RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 PPFIA1Q13136 1202 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 CYP26C1Q6V0L0 522 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 CCDC121Q6ZUS5 278 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 MAATS1Q7Z4T9 603 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 TC2NQ8N9U0 490 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 LRP2BPQ9P2M1 347 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 CEP131Q9UPN4 1083 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 PCDH11XQ9BZA7 1347 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 PCDH11YQ9BZA8 1340 aa9.71□□□□□ -0.85
CCDC149-204ENST00000504487 NRXN1Q9ULB1 1477 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 MAP2K7O14733 419 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 GGCXP38435 758 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 ARHGAP25P42331 645 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 CLNS1AP54105 237 aaKnown RBP9.71□□□□□ -0.86
CCDC149-204ENST00000504487 LRCH2Q5VUJ6 765 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 RRAGBQ5VZM2 374 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 EHBP1Q8NDI1 1231 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 MACROD2A1Z1Q3 448 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 IDEP14735 1019 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 HNRNPH1P31943 449 aaKnown RBP9.71□□□□□ -0.86
CCDC149-204ENST00000504487 SSRP1Q08945 709 aaKnown RBP9.71□□□□□ -0.86
CCDC149-204ENST00000504487 CEP85LQ5SZL2 805 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 SMIM5Q71RC9 77 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 GSPT2Q8IYD1 628 aaKnown RBP9.71□□□□□ -0.86
CCDC149-204ENST00000504487 ANKZF1Q9H8Y5 726 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 VEZTQ9HBM0 779 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.86
CCDC149-204ENST00000504487 CRB1P82279 1406 aa9.71□□□□□ -0.86
CCDC149-204ENST00000504487 FRMD3A2A2Y4 597 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 CYP27B1O15528 508 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 XBP1P17861 261 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 IGHMBP2P38935 993 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 UBXN1Q04323 297 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 GRAMD1CQ8IYS0 662 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 NOA1Q8NC60 698 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 DBNLQ9UJU6 430 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 SYNRGQ9UMZ2 1314 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 A0A1B0GUA9 196 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 LRRIQ3A6PVS8 624 aaPredicted RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 CTDNEP1O95476 244 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 KIF23Q02241 960 aaPredicted RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 NEDD9Q14511 834 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 TSGA10IPQ3SY00 556 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 KCTD16Q68DU8 428 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 WASF1Q92558 559 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 AIFM3Q96NN9 605 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 CPS1P31327 1500 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 USP42Q9H9J4 1324 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 ZBTB43O43298 467 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 N4BP2L2Q92802 583 aaPredicted RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 PSMB7Q99436 277 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 ODF2LQ9ULJ1 636 aa9.7□□□□□ -0.86
CCDC149-204ENST00000504487 LUC7L2Q9Y383 392 aaKnown RBP9.7□□□□□ -0.86
CCDC149-204ENST00000504487 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 TEX33O43247 280 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 COBLO75128 1261 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 HSPD1P10809 573 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 TRIM21P19474 475 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 CYLC1P35663 651 aaPredicted RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 CFAP58Q5T655 872 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 STOX1Q6ZVD7 989 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 STAMQ92783 540 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 AIDAQ96BJ3 306 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 KAT14Q9H8E8 782 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 HELLSQ9NRZ9 838 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 TAB2Q9NYJ8 693 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 MAN1B1Q9UKM7 699 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 SLC12A7Q9Y666 1083 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 FOXN1O15353 648 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 USO1O60763 962 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 KRT83P78385 493 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 HLTFQ14527 1009 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 RAD9BQ6WBX8 426 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 IFT81Q8WYA0 676 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 PANX2Q96RD6 677 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 ANKIB1Q9P2G1 1089 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 MROH2AA6NES4 1674 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 ANKRD18BA2A2Z9 1011 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 IFIT3O14879 490 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 RNF113AO15541 343 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 HPDP32754 393 aaPredicted RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 KIF5AQ12840 1032 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 ENOX1Q8TC92 643 aaKnown RBP9.69□□□□□ -0.86
CCDC149-204ENST00000504487 PLCD4Q9BRC7 762 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 MAPK8IP1Q9UQF2 711 aa9.69□□□□□ -0.86
CCDC149-204ENST00000504487 SRGAP2O75044 1071 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 RFC4P35249 363 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 VAV2P52735 878 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 SPAG1Q07617 926 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 TMEM67Q5HYA8 995 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 UBAC1Q9BSL1 405 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 BABAM1Q9NWV8 329 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 CTNND2Q9UQB3 1225 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 GNPATO15228 680 aa9.68□□□□□ -0.86
CCDC149-204ENST00000504487 SARNPP82979 210 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms