RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 FLCNQ8NFG4 579 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 AIDAQ96BJ3 306 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 HVCN1Q96D96 273 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
NIPBL-204ENST00000504430 ZNF69Q9UC07 566 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 HDAC5Q9UQL6 1122 aa6.31□□□□□ -1.4
NIPBL-204ENST00000504430 MT-CO1P00395 513 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 LMNB2Q03252 620 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ZNF354CQ86Y25 554 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 POF1BQ8WVV4 589 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ATRIPQ8WXE1 791 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ORC4O43929 436 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ABLIM3O94929 683 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 CDK8P49336 464 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 TMEM67Q5HYA8 995 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ANKRD23Q86SG2 305 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ZSWIM2Q8NEG5 633 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 SP7Q8TDD2 431 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-204ENST00000504430 SRCIN1Q9C0H9 1055 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 AAASQ9NRG9 546 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 FBXO2Q9UK22 296 aaPredicted RBP6.3□□□□□ -1.4
NIPBL-204ENST00000504430 A0A1W2PQH9 124 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 GIPC1O14908 333 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ATXN2LQ8WWM7 1075 aaKnown RBP6.3□□□□□ -1.4
NIPBL-204ENST00000504430 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 PHTF1Q9UMS5 762 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 DGKBQ9Y6T7 804 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 ERBB4Q15303 1308 aa6.3□□□□□ -1.4
NIPBL-204ENST00000504430 A0A1W2PP55 124 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 POTEIP0CG38 1075 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 POTEJP0CG39 1038 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 NCAM1P13591 858 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 HOXC13P31276 330 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 AGAP9Q5VTM2 703 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 OTOP3Q7RTS5 596 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 ELAC2Q9BQ52 826 aaKnown RBP6.29□□□□□ -1.4
NIPBL-204ENST00000504430 VPS45Q9NRW7 570 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SAP30BPQ9UHR5 308 aaKnown RBP6.29□□□□□ -1.4
NIPBL-204ENST00000504430 PSDA5PKW4 1024 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-204ENST00000504430 NEMP1O14524 444 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 GRIA2P42262 883 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 POTEAQ6S8J7 498 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SRLQ86TD4 932 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SMYD2Q9NRG4 433 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 MAP4K5Q9Y4K4 846 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 PF4V1P10720 104 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 DGKGP49619 791 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
NIPBL-204ENST00000504430 FGD2Q7Z6J4 655 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 KDF1Q8NAX2 398 aaPredicted RBP6.29□□□□□ -1.4
NIPBL-204ENST00000504430 CHMP4CQ96CF2 233 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 CCDC34Q96HJ3 373 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SPATA9Q9BWV2 254 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 WBP1LQ9NX94 342 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 ZFATQ9P243 1243 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 SALL4Q9UJQ4 1053 aa6.29□□□□□ -1.4
NIPBL-204ENST00000504430 PHLDB1Q86UU1 1377 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 PYGLP06737 847 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 GRIA4P48058 902 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 WNT7BP56706 349 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 NDUFAF2Q8N183 169 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 ZBTB38Q8NAP3 1195 aaPredicted RBP6.28□□□□□ -1.4
NIPBL-204ENST00000504430 CCDC47Q96A33 483 aaKnown RBP6.28□□□□□ -1.4
NIPBL-204ENST00000504430 SH3KBP1Q96B97 665 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 HERPUD2Q9BSE4 406 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 CEP72Q9P209 647 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 MAP3K6O95382 1288 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 CES1P23141 567 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 NEK4P51957 841 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 BIRC3Q13489 604 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 SPRED3Q2MJR0 410 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 GLIPR1L2Q4G1C9 344 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 RPAINQ86UA6 219 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 DHRS4Q9BTZ2 278 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 FBRSQ9HAH7 460 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.28□□□□□ -1.4
NIPBL-204ENST00000504430 TMX2Q9Y320 296 aa6.28□□□□□ -1.4
NIPBL-204ENST00000504430 F5H423 210 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 ATICP31939 592 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 MAPK9P45984 424 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 PTPN11Q06124 597 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 ODF1Q14990 250 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 PPP1R26Q5T8A7 1209 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 EPM2AIP1Q7L775 607 aaPredicted RBP6.27□□□□□ -1.41
NIPBL-204ENST00000504430 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF516Q92618 1163 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 APOL5Q9BWW9 433 aa6.27□□□□□ -1.41
NIPBL-204ENST00000504430 GPR39O43194 453 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms