RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 OGFOD3Q6PK18 319 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 GK5Q6ZS86 529 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 MRPL41Q8IXM3 137 aaKnown RBP8.37□□□□□ -1.07
COPS4-203ENST00000504274 DUSP23Q9BVJ7 150 aa8.37□□□□□ -1.07
COPS4-203ENST00000504274 LRIG2O94898 1065 aa8.36□□□□□ -1.07
COPS4-203ENST00000504274 CST3P01034 146 aaPredicted RBP8.36□□□□□ -1.07
COPS4-203ENST00000504274 NPM2Q86SE8 214 aaKnown RBP8.36□□□□□ -1.07
COPS4-203ENST00000504274 MCATQ8IVS2 390 aaKnown RBP8.36□□□□□ -1.07
COPS4-203ENST00000504274 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
COPS4-203ENST00000504274 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
COPS4-203ENST00000504274 EHMT1Q9H9B1 1298 aa8.36□□□□□ -1.07
COPS4-203ENST00000504274 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
COPS4-203ENST00000504274 CHURC1-FNTBB4DL54 471 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 SLITRK5O94991 958 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 ATE1O95260 518 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 TGFB1P01137 390 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 GJA8P48165 433 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 SLC6A19Q695T7 634 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 SLC51AQ86UW1 340 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
COPS4-203ENST00000504274 RIN3Q8TB24 985 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 ANTXR1Q9H6X2 564 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 ATG3Q9NT62 314 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 GINM1Q9NU53 330 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 KLHL3Q9UH77 587 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 INPP5FQ9Y2H2 1132 aa8.35□□□□□ -1.07
COPS4-203ENST00000504274 ZNF165P49910 485 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 FAM214BQ7L5A3 538 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 FAM13CQ8NE31 585 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 RASGRP4Q8TDF6 673 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 OSBPL1AQ9BXW6 950 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 EFR3BQ9Y2G0 817 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 U3KQE9 123 aa8.34□□□□□ -1.07
COPS4-203ENST00000504274 CNTNAP4Q9C0A0 1308 aa8.33□□□□□ -1.08
COPS4-203ENST00000504274 MIPEPQ99797 713 aa8.33□□□□□ -1.08
COPS4-203ENST00000504274 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
COPS4-203ENST00000504274 PPT2Q9UMR5 302 aa8.33□□□□□ -1.08
COPS4-203ENST00000504274 SLC22A31A6NKX4 558 aa8.32□□□□□ -1.08
COPS4-203ENST00000504274 EOMESO95936 686 aa8.32□□□□□ -1.08
COPS4-203ENST00000504274 HOXA10P31260 410 aaPredicted RBP8.32□□□□□ -1.08
COPS4-203ENST00000504274 DUSP27Q5VZP5 1158 aa8.32□□□□□ -1.08
COPS4-203ENST00000504274 MFSD2AQ8NA29 543 aa8.32□□□□□ -1.08
COPS4-203ENST00000504274 HEXIM2Q96MH2 286 aaKnown RBP8.32□□□□□ -1.08
COPS4-203ENST00000504274 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
COPS4-203ENST00000504274 MED26O95402 600 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 SOX9P48436 509 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 LETMD1Q6P1Q0 360 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 GIMAP7Q8NHV1 300 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 LRRC4CQ9HCJ2 640 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 PIM2Q9P1W9 311 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 ZNRF3Q9ULT6 936 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
COPS4-203ENST00000504274 CYP27A1Q02318 531 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 CYP27C1Q4G0S4 372 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 ARSHQ5FYA8 562 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 OVOS1Q6IE37 1185 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 CCDC81Q6ZN84 652 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 CDH24Q86UP0 819 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 SLFN12Q8IYM2 578 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 FAM181AQ8N9Y4 354 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 METTL22Q9BUU2 404 aaPredicted RBP8.3□□□□□ -1.08
COPS4-203ENST00000504274 GMIPQ9P107 970 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 RNF112Q9ULX5 631 aa8.3□□□□□ -1.08
COPS4-203ENST00000504274 NASPP49321 788 aaPredicted RBP8.29□□□□□ -1.08
COPS4-203ENST00000504274 YARSP54577 528 aaKnown RBP8.29□□□□□ -1.08
COPS4-203ENST00000504274 BAHD1Q8TBE0 780 aaPredicted RBP8.29□□□□□ -1.08
COPS4-203ENST00000504274 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
COPS4-203ENST00000504274 CYP26A1O43174 497 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 COL9A2Q14055 689 aaPredicted RBP8.28□□□□□ -1.08
COPS4-203ENST00000504274 FBXW10Q5XX13 1052 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 CYB5D2Q8WUJ1 264 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 TMEM40Q8WWA1 233 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 FERD3LQ96RJ6 166 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 KIF2CQ99661 725 aa8.28□□□□□ -1.08
COPS4-203ENST00000504274 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 FOSL1P15407 271 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 ATF4P18848 351 aaPredicted RBP8.27□□□□□ -1.09
COPS4-203ENST00000504274 POLR2BP30876 1174 aaKnown RBP8.27□□□□□ -1.09
COPS4-203ENST00000504274 SSTR4P31391 388 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 MLECQ14165 292 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 ZMYM1Q5SVZ6 1142 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 SPATA32Q96LK8 384 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 CEP131Q9UPN4 1083 aa8.27□□□□□ -1.09
COPS4-203ENST00000504274 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
COPS4-203ENST00000504274 OXCT1P55809 520 aa8.26□□□□□ -1.09
COPS4-203ENST00000504274 CPSF6Q16630 551 aaKnown RBP eCLIP8.26□□□□□ -1.09
COPS4-203ENST00000504274 RUFY4Q6ZNE9 571 aa8.26□□□□□ -1.09
COPS4-203ENST00000504274 SEC16BQ96JE7 1060 aa8.26□□□□□ -1.09
COPS4-203ENST00000504274 ZC3H7BQ9UGR2 993 aaKnown RBP8.26□□□□□ -1.09
COPS4-203ENST00000504274 TPX2Q9ULW0 747 aaKnown RBP8.26□□□□□ -1.09
COPS4-203ENST00000504274 COL17A1Q9UMD9 1497 aaPredicted RBP8.26□□□□□ -1.09
COPS4-203ENST00000504274 UBOX5O94941 541 aa8.25□□□□□ -1.09
COPS4-203ENST00000504274 NME1P15531 152 aaKnown RBP8.25□□□□□ -1.09
COPS4-203ENST00000504274 NLRC3Q7RTR2 1065 aa8.25□□□□□ -1.09
COPS4-203ENST00000504274 PHACTR4Q8IZ21 702 aa8.25□□□□□ -1.09
COPS4-203ENST00000504274 CCDC74BQ96LY2 380 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms