RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 IDI2Q9BXS1 227 aa15.79■□□□□ 0.12
LSM6-204ENST00000504181 ADAMTS8Q9UP79 889 aa15.79■□□□□ 0.12
LSM6-204ENST00000504181 KBTBD13C9JR72 458 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 MYCNP04198 464 aaPredicted RBP15.78■□□□□ 0.12
LSM6-204ENST00000504181 IGFBP4P22692 258 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 HERVK_113P62684 666 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 MAP2K5Q13163 448 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 PICALMQ13492 652 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 ADGRE1Q14246 886 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 Q3C1V9 767 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 VGLL2Q8N8G2 317 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 PAGR1Q9BTK6 254 aa15.78■□□□□ 0.12
LSM6-204ENST00000504181 CWC22Q9HCG8 908 aaKnown RBP15.78■□□□□ 0.12
LSM6-204ENST00000504181 DDX4Q9NQI0 724 aaKnown RBP15.78■□□□□ 0.12
LSM6-204ENST00000504181 UTYO14607 1347 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 F6X3S4 739 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 GRM8O00222 908 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 PDE8BO95263 885 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 LDHBP07195 334 aaKnown RBP15.77■□□□□ 0.12
LSM6-204ENST00000504181 BMP1P13497 986 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 ERVK-9P63128 1117 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 ERVK-24P63145 666 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 SNX17Q15036 470 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 TWISTNBQ3B726 338 aaPredicted RBP15.77■□□□□ 0.12
LSM6-204ENST00000504181 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 BEND3Q5T5X7 828 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 ANO1Q5XXA6 986 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 RBPJLQ9UBG7 517 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 NDUFB9Q9Y6M9 179 aa15.77■□□□□ 0.12
LSM6-204ENST00000504181 PBX2P40425 430 aa15.76■□□□□ 0.11
LSM6-204ENST00000504181 TFF2Q03403 129 aa15.76■□□□□ 0.11
LSM6-204ENST00000504181 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
LSM6-204ENST00000504181 EDC3Q96F86 508 aaKnown RBP15.76■□□□□ 0.11
LSM6-204ENST00000504181 OSBPL5Q9H0X9 879 aaPredicted RBP15.76■□□□□ 0.11
LSM6-204ENST00000504181 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.76■□□□□ 0.11
LSM6-204ENST00000504181 FAM86C2PA6NEL3 165 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 USP17L5A8MUK1 530 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 APAF1O14727 1248 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 CYP2C19P33261 490 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 KCNQ1P51787 676 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 TLE2Q04725 743 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 FPGSQ05932 587 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 MTMR2Q13614 643 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 CCDC129Q6ZRS4 1044 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 ARRDC4Q8NCT1 418 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
LSM6-204ENST00000504181 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
LSM6-204ENST00000504181 CXXC1Q9P0U4 656 aaPredicted RBP15.75■□□□□ 0.11
LSM6-204ENST00000504181 KIF16BQ96L93 1317 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 ZNF236Q9UL36 1845 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 GRXCR1A8MXD5 290 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 CLTBP09497 229 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 IFIT1P09914 478 aaKnown RBP15.74■□□□□ 0.11
LSM6-204ENST00000504181 RAG1P15918 1043 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 ADCYAP1R1P41586 468 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 MRE11P49959 708 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 ATP2B2Q01814 1243 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 SUCLG2Q96I99 432 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 PBX4Q9BYU1 374 aa15.74■□□□□ 0.11
LSM6-204ENST00000504181 TSPYL2Q9H2G4 693 aaPredicted RBP15.74■□□□□ 0.11
LSM6-204ENST00000504181 HOXA7P31268 230 aaPredicted RBP15.73■□□□□ 0.11
LSM6-204ENST00000504181 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
LSM6-204ENST00000504181 WDR78Q5VTH9 848 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 AS3MTQ9HBK9 375 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 C11orf16Q9NQ32 467 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 TMOD4Q9NZQ9 345 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 WDFY4Q6ZS81 3184 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 FOCADQ5VW36 1801 aa15.73■□□□□ 0.11
LSM6-204ENST00000504181 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
LSM6-204ENST00000504181 TBC1D12O60347 775 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 CYBAP13498 195 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 FGFR2P21802 821 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 CAP2P40123 477 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 RALBP1Q15311 655 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 PUM3Q15397 648 aaKnown RBP15.72■□□□□ 0.11
LSM6-204ENST00000504181 NPLOC4Q8TAT6 608 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 KAZALD1Q96I82 304 aa15.72■□□□□ 0.11
LSM6-204ENST00000504181 GAKO14976 1311 aa15.71■□□□□ 0.11
LSM6-204ENST00000504181 PRRC2BQ5JSZ5 2229 aaKnown RBP15.71■□□□□ 0.11
LSM6-204ENST00000504181 GPR37L1O60883 481 aa15.71■□□□□ 0.11
LSM6-204ENST00000504181 C1orf53Q5VUE5 145 aa15.71■□□□□ 0.11
LSM6-204ENST00000504181 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
LSM6-204ENST00000504181 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.71■□□□□ 0.11
LSM6-204ENST00000504181 CACNA1AO00555 2505 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 KIAA0355O15063 1070 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 GLRX3O76003 335 aaKnown RBP15.7■□□□□ 0.1
LSM6-204ENST00000504181 SLC5A1P13866 664 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 BTDP43251 543 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 BACE1P56817 501 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 AAK1Q2M2I8 961 aa15.7■□□□□ 0.1
LSM6-204ENST00000504181 KHSRPQ92945 711 aaKnown RBP eCLIP15.7■□□□□ 0.1
LSM6-204ENST00000504181 SLC15A5A6NIM6 579 aa15.69■□□□□ 0.1
LSM6-204ENST00000504181 PQBP1O60828 265 aaKnown RBP15.69■□□□□ 0.1
LSM6-204ENST00000504181 PTPREP23469 700 aa15.69■□□□□ 0.1
LSM6-204ENST00000504181 LRRC41Q15345 812 aa15.69■□□□□ 0.1
LSM6-204ENST00000504181 BICC1Q9H694 974 aaKnown RBP15.69■□□□□ 0.1
LSM6-204ENST00000504181 SALL1Q9NSC2 1324 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms