RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 HOXA10P31260 410 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-208ENST00000504047 APOBRQ0VD83 1088 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 NKG7Q16617 165 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 TMEM201Q5SNT2 666 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 DTX1Q86Y01 620 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 FAM13CQ8NE31 585 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 NT5C1AQ9BXI3 368 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 PRDM5Q9NQX1 630 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-208ENST00000504047 BSDC1Q9NW68 430 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-208ENST00000504047 KIAA1522Q9P206 1035 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-208ENST00000504047 ADAMTS1Q9UHI8 967 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 CORINQ9Y5Q5 1042 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 PRR36Q9H6K5 1346 aa5.13□□□□□ -1.59
ATXN3-208ENST00000504047 GNAT3A8MTJ3 354 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 IGF2BP3O00425 579 aaKnown RBP eCLIP5.12□□□□□ -1.59
ATXN3-208ENST00000504047 GRIN3BO60391 1043 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 SPINK2P20155 84 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 ZNF165P49910 485 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 ZNF394Q53GI3 561 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 LETMD1Q6P1Q0 360 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 ZNF654Q8IZM8 581 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 FBXO27Q8NI29 283 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 NETO1Q8TDF5 533 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 XAGE3Q8WTP9 111 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 NKD1Q969G9 470 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 ACSF2Q96CM8 615 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-208ENST00000504047 COX4I2Q96KJ9 171 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 UBP1Q9NZI7 540 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 REV1Q9UBZ9 1251 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 ZC3H7BQ9UGR2 993 aaKnown RBP5.12□□□□□ -1.59
ATXN3-208ENST00000504047 MAPK8IP1Q9UQF2 711 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 PCDHGB7Q9Y5F8 929 aa5.12□□□□□ -1.59
ATXN3-208ENST00000504047 SLITRK5O94991 958 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 HTR3BO95264 441 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 MED26O95402 600 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 WNT11O96014 354 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 CEACAM5P06731 702 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 MCM4P33991 863 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 ETV3P41162 512 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 RBM25P49756 843 aaKnown RBP5.11□□□□□ -1.59
ATXN3-208ENST00000504047 CHMP4BP1P59074 171 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 IFI16Q16666 785 aaKnown RBP5.11□□□□□ -1.59
ATXN3-208ENST00000504047 MSMPQ1L6U9 139 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 SEZ6Q53EL9 994 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 SFRP5Q5T4F7 317 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 VSIG10LQ86VR7 867 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 STK11IPQ8N1F8 1099 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 MISP3Q96FF7 219 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 DPH2Q9BQC3 489 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-208ENST00000504047 BRMS1Q9HCU9 246 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 KLHL3Q9UH77 587 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 DDX41Q9UJV9 622 aaKnown RBP5.11□□□□□ -1.59
ATXN3-208ENST00000504047 POLR3KQ9Y2Y1 108 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-208ENST00000504047 PCDHB14Q9Y5E9 798 aa5.11□□□□□ -1.59
ATXN3-208ENST00000504047 TMEM265A0A087WTH1 108 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 EOMESO95936 686 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 ITIH2P19823 946 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 CRKP46108 304 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 HDLBPQ00341 1268 aaKnown RBP5.1□□□□□ -1.59
ATXN3-208ENST00000504047 NT5DC4Q86YG4 428 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 SLFN12Q8IYM2 578 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 PHACTR4Q8IZ21 702 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 REXO1Q8N1G1 1221 aaKnown RBP5.1□□□□□ -1.59
ATXN3-208ENST00000504047 FAM181AQ8N9Y4 354 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 CYB5D2Q8WUJ1 264 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 SPATA32Q96LK8 384 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 CCDC39Q9UFE4 941 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 SLC5A6Q9Y289 635 aa5.1□□□□□ -1.59
ATXN3-208ENST00000504047 FAM155AB1AL88 458 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 ATE1O95260 518 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 PRNPP04156 253 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 TNNI2P48788 182 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 OXCT1P55809 520 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 RACK1P63244 317 aaKnown RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 LRRFIP1Q32MZ4 808 aaKnown RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 GK5Q6ZS86 529 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 METTL16Q86W50 562 aaKnown RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 SLITRK4Q8IW52 837 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 PLD6Q8N2A8 252 aaKnown RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 HRASLS5Q96KN8 279 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 CCDC74BQ96LY2 380 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 FBXL18Q96ME1 805 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 HEXIM2Q96MH2 286 aaKnown RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 GMIPQ9P107 970 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 CEP131Q9UPN4 1083 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-208ENST00000504047 SNX11Q9Y5W9 270 aa5.09□□□□□ -1.59
ATXN3-208ENST00000504047 UPK3BL1B0FP48 263 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 UPK3BL2E5RIL1 263 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 IMPDH2P12268 514 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 RAG1P15918 1043 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 GBP1P32455 592 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 KIR3DL1P43629 444 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 CLCN7P51798 805 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 PRKCQQ04759 706 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 C22orf34Q6ZV56 151 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 FAM214BQ7L5A3 538 aa5.08□□□□□ -1.6
ATXN3-208ENST00000504047 CDH24Q86UP0 819 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms