RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 MAP3K11Q16584 847 aa24.75■■□□□ 1.55
UBE2D3-216ENST00000503742 CMTR1Q8N1G2 835 aaKnown RBP24.75■■□□□ 1.55
UBE2D3-216ENST00000503742 RBM28Q9NW13 759 aaKnown RBP24.75■■□□□ 1.55
UBE2D3-216ENST00000503742 C2CD5Q86YS7 1000 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 CCAR1Q8IX12 1150 aaKnown RBP24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 AMOTL1Q8IY63 956 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 KCNG4Q8TDN1 519 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 PCDHA7Q9UN72 937 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 TSPY2A6NKD2 308 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 ME1P48163 572 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 ANO1Q5XXA6 986 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 STYK1Q6J9G0 422 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 RCSD1Q6JBY9 416 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 MAPKAPK5Q8IW41 473 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 DYNLL2Q96FJ2 89 aa24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.74■■□□□ 1.55
UBE2D3-216ENST00000503742 MMP1P03956 469 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 CAMK4Q16566 473 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 SLC4A8Q2Y0W8 1093 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 ADALQ6DHV7 355 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 TEX11Q8IYF3 940 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 CCDC82Q8N4S0 544 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 ZNF622Q969S3 477 aaKnown RBP eCLIP24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 PDLIM2Q96JY6 352 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 TNMDQ9H2S6 317 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 GOLPH3LQ9H4A5 285 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 RTN4Q9NQC3 1192 aaKnown RBP24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 FOCADQ5VW36 1801 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 PLCD1P51178 756 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 STK38Q15208 465 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 UVSSAQ2YD98 709 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 ENGASEQ8NFI3 743 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 ANKS1AQ92625 1134 aa24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 TMX4Q9H1E5 349 aaPredicted RBP24.73■■□□□ 1.55
UBE2D3-216ENST00000503742 A0A1W2PQ27 194 aa24.72■■□□□ 1.55
UBE2D3-216ENST00000503742 A0A1W2PQ64 194 aa24.72■■□□□ 1.55
UBE2D3-216ENST00000503742 A0A1W2PQD8 194 aa24.72■■□□□ 1.55
UBE2D3-216ENST00000503742 SNW1Q13573 536 aaKnown RBP24.72■■□□□ 1.55
UBE2D3-216ENST00000503742 CERS5Q8N5B7 392 aa24.72■■□□□ 1.55
UBE2D3-216ENST00000503742 H0YIN7 160 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 SPTLC2O15270 562 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 PRPF3O43395 683 aaKnown RBP24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 TFAP4Q01664 338 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 FAM43AQ8N2R8 423 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 IL17RBQ9NRM6 502 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 STK32BQ9NY57 414 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 DAGLAQ9Y4D2 1042 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 FLT1P17948 1338 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 PLEKHA8P1O95397 391 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 CCDC192P0DO97 292 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 PKN1Q16512 942 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 TMTC3Q6ZXV5 915 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 DGKHQ86XP1 1220 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 EYA3Q99504 573 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 TCP11L1Q9NUJ3 509 aa24.71■■□□□ 1.55
UBE2D3-216ENST00000503742 SLX4Q8IY92 1834 aa24.7■■□□□ 1.54
UBE2D3-216ENST00000503742 MYH1P12882 1939 aa24.7■■□□□ 1.54
UBE2D3-216ENST00000503742 GNL2Q13823 731 aaKnown RBP24.7■■□□□ 1.54
UBE2D3-216ENST00000503742 SLC39A14Q15043 492 aa24.7■■□□□ 1.54
UBE2D3-216ENST00000503742 SAP30BPQ9UHR5 308 aaKnown RBP24.7■■□□□ 1.54
UBE2D3-216ENST00000503742 FAM160A1Q05DH4 1040 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 DOK7Q18PE1 504 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 CCDC73Q6ZRK6 1079 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 FOXP1Q9H334 677 aaPredicted RBP24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 MKNK2Q9HBH9 465 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 KCNJ14Q9UNX9 436 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 SAFBQ15424 915 aaKnown RBP eCLIP24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 SF3A1Q15459 793 aaKnown RBP24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 CCDC178Q5BJE1 867 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 NOSTRINQ8IVI9 506 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 DIS3L2Q8IYB7 885 aaKnown RBP24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 FSIP1Q8NA03 581 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 MAP3K14Q99558 947 aa24.69■■□□□ 1.54
UBE2D3-216ENST00000503742 BTBD18B2RXH4 712 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 AKAP17AQ02040 695 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 PTPAQ15257 358 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 C16orf86Q6ZW13 317 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 CKAP2LQ8IYA6 745 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 SLC44A5Q8NCS7 719 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 MRPS27Q92552 414 aaKnown RBP24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
UBE2D3-216ENST00000503742 RASA1P20936 1047 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 AXDND1Q5T1B0 1012 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 CTCFLQ8NI51 663 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 SHISA4Q96DD7 197 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 CNTNAP5Q8WYK1 1306 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 TYRO3Q06418 890 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 ZNF444Q8N0Y2 327 aaPredicted RBP24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 FBXW7Q969H0 707 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 ZNF287Q9HBT7 754 aa24.67■■□□□ 1.54
UBE2D3-216ENST00000503742 PPP6R2O75170 966 aa24.66■■□□□ 1.54
UBE2D3-216ENST00000503742 PODNQ7Z5L7 613 aa24.66■■□□□ 1.54
UBE2D3-216ENST00000503742 FMR1NBQ8N0W7 255 aaPredicted RBP24.66■■□□□ 1.54
UBE2D3-216ENST00000503742 SRBD1Q8N5C6 995 aaKnown RBP24.66■■□□□ 1.54
UBE2D3-216ENST00000503742 MRVI1Q9Y6F6 885 aa24.66■■□□□ 1.54
UBE2D3-216ENST00000503742 CTAGE5O15320 804 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 TSPY3P0CV98 308 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 TSPY8P0CW00 308 aa24.65■■□□□ 1.54
UBE2D3-216ENST00000503742 CDK8P49336 464 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms