RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-218ENST00000503547 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
NR1I3-218ENST00000503547 DHX36Q9H2U1 1008 aaKnown RBP10.93□□□□□ -0.66
NR1I3-218ENST00000503547 SNRKQ9NRH2 765 aa10.93□□□□□ -0.66
NR1I3-218ENST00000503547 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
NR1I3-218ENST00000503547 IPO8O15397 1037 aaKnown RBP10.92□□□□□ -0.66
NR1I3-218ENST00000503547 GDF11O95390 407 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
NR1I3-218ENST00000503547 SYN1P17600 705 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 BACE1P56817 501 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 SOCS4Q8WXH5 440 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 TRIB2Q92519 343 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 NUDT12Q9BQG2 462 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 C11orf49Q9H6J7 331 aa10.92□□□□□ -0.66
NR1I3-218ENST00000503547 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
NR1I3-218ENST00000503547 FLT1P17948 1338 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 DLL1O00548 723 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 PEX10O60683 326 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 ZKSCAN1P17029 563 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-218ENST00000503547 HERVK_113P62684 666 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 SAP30BPQ9UHR5 308 aaKnown RBP10.91□□□□□ -0.66
NR1I3-218ENST00000503547 GJD2Q9UKL4 321 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 PALD1Q9ULE6 856 aa10.91□□□□□ -0.66
NR1I3-218ENST00000503547 C19orf81C9J6K1 198 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 TRIM27P14373 513 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 ATF7IPQ6VMQ6 1270 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
NR1I3-218ENST00000503547 FEZ1Q99689 392 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 GDF15Q99988 308 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 ZBTB21Q9ULJ3 1066 aa10.9□□□□□ -0.66
NR1I3-218ENST00000503547 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.67
NR1I3-218ENST00000503547 MAPK4P31152 587 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 HOXA7P31268 230 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 BMP8BP34820 402 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 RGS2P41220 211 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 MAGEA10P43363 369 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 ERVK-9P63128 1117 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 ERVK-24P63145 666 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 ZYXQ15942 572 aaKnown RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 TNNI3KQ59H18 835 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 WDR78Q5VTH9 848 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 ADGRA1Q86SQ6 560 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 FOXP4Q8IVH2 680 aaPredicted RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
NR1I3-218ENST00000503547 DEFB123Q8N688 67 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 DBNDD2Q9BQY9 259 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 DNAJC18Q9H819 358 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 OGDHLQ9ULD0 1010 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 TNNQ9UQP3 1299 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 FPGT-TNNI3KV9GXZ4 949 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 UNC80Q8N2C7 3258 aa10.89□□□□□ -0.67
NR1I3-218ENST00000503547 XRCC5P13010 732 aaKnown RBP10.88□□□□□ -0.67
NR1I3-218ENST00000503547 CYP7A1P22680 504 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 USP5P45974 858 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 JAG1P78504 1218 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 GPR142Q7Z601 462 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 TDHQ8IZJ6 230 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 GTF3C2Q8WUA4 911 aaPredicted RBP10.88□□□□□ -0.67
NR1I3-218ENST00000503547 UBE2OQ9C0C9 1292 aaKnown RBP10.88□□□□□ -0.67
NR1I3-218ENST00000503547 PORCNQ9H237 461 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 GINM1Q9NU53 330 aa10.88□□□□□ -0.67
NR1I3-218ENST00000503547 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
NR1I3-218ENST00000503547 PFASO15067 1338 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 SURF6O75683 361 aaKnown RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 BCAR3O75815 825 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 GLRX3O76003 335 aaKnown RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 GH2P01242 217 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 CYP2E1P05181 493 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 CCND3P30281 292 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 ZAP70P43403 619 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 MNX1P50219 401 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 PPP4CP60510 307 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 CACNB2Q08289 660 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-218ENST00000503547 CCL14Q16627 93 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 MAP3K21Q5TCX8 1036 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 USP17L2Q6R6M4 530 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 Q7L0L9 218 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 MIGA1Q8NAN2 632 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 APBA2Q99767 749 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 RBPJLQ9UBG7 517 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
NR1I3-218ENST00000503547 COL11A1P12107 1806 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-218ENST00000503547 MYH7P12883 1935 aa10.86□□□□□ -0.67
NR1I3-218ENST00000503547 RLFQ13129 1914 aa10.86□□□□□ -0.67
NR1I3-218ENST00000503547 CCNA1P78396 465 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms