RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 PABPC4Q13310 644 aaKnown RBP eCLIP23.59■■□□□ 1.374e-7■■■■□ 24.1
UBE2D3-215ENST00000503418 MTMR2Q13614 643 aa23.59■■□□□ 1.37
UBE2D3-215ENST00000503418 BOLA2Q9H3K6 86 aa23.59■■□□□ 1.37
UBE2D3-215ENST00000503418 SH3D19Q5HYK7 790 aa23.58■■□□□ 1.37
UBE2D3-215ENST00000503418 EDC3Q96F86 508 aaKnown RBP23.58■■□□□ 1.37
UBE2D3-215ENST00000503418 RIOK1Q9BRS2 568 aaKnown RBP23.58■■□□□ 1.37
UBE2D3-215ENST00000503418 WDR18Q9BV38 432 aa23.58■■□□□ 1.37
UBE2D3-215ENST00000503418 ZBTB21Q9ULJ3 1066 aa23.58■■□□□ 1.37
UBE2D3-215ENST00000503418 ZNF532Q9HCE3 1301 aa23.58■■□□□ 1.36
UBE2D3-215ENST00000503418 GRK4P32298 578 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 LRRCC1Q9C099 1032 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 GINM1Q9NU53 330 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 TMOD4Q9NZQ9 345 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 SERPINB13Q9UIV8 391 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 GABRQQ9UN88 632 aa23.57■■□□□ 1.36
UBE2D3-215ENST00000503418 DDX60LQ5H9U9 1706 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 TNPO2O14787 897 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 BACE1P56817 501 aa23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 PRPF38BQ5VTL8 546 aaKnown RBP23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 TTC6Q86TZ1 520 aa23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 ASCC2Q9H1I8 757 aaPredicted RBP23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 PAG1Q9NWQ8 432 aa23.56■■□□□ 1.36
UBE2D3-215ENST00000503418 SMARCA5O60264 1052 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 GH2P01242 217 aa23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 FAM110CQ1W6H9 321 aa23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 CRNKL1Q9BZJ0 848 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 EHD4Q9H223 541 aa23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 BIN2Q9UBW5 565 aaPredicted RBP23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 MKI67P46013 3256 aaKnown RBP23.55■■□□□ 1.36
UBE2D3-215ENST00000503418 USP17L10C9JJH3 530 aa23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 ATP5JP18859 108 aa23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 IRX3P78415 501 aaPredicted RBP23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 MTFR1Q15390 333 aa23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 DOCK3Q8IZD9 2030 aa23.54■■□□□ 1.36
UBE2D3-215ENST00000503418 MYH7P12883 1935 aa23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 TCRBV5S4A2TA0A5A2 114 aa23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 C19orf81C9J6K1 198 aa23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 GCLCP48506 637 aaPredicted RBP23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 TATDN1Q6P1N9 297 aa23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 LCORLQ8N3X6 602 aa23.53■■□□□ 1.36
UBE2D3-215ENST00000503418 FLT3LGP49771 235 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 PLCD1P51178 756 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 CERKLQ49MI3 558 aaPredicted RBP23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 SLAIN1Q8ND83 568 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 SDR42E1Q8WUS8 393 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 COA7Q96BR5 231 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 HAUS7Q99871 368 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 MCM9Q9NXL9 1143 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 TAOK2Q9UL54 1235 aa23.52■■□□□ 1.36
UBE2D3-215ENST00000503418 UBXN2AP68543 259 aa23.51■■□□□ 1.35
UBE2D3-215ENST00000503418 RAB3GAP1Q15042 981 aa23.51■■□□□ 1.35
UBE2D3-215ENST00000503418 SLFNL1Q499Z3 407 aa23.51■■□□□ 1.35
UBE2D3-215ENST00000503418 FEZ1Q99689 392 aa23.51■■□□□ 1.35
UBE2D3-215ENST00000503418 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.51■■□□□ 1.359e-7■■□□□ 13.5
UBE2D3-215ENST00000503418 ARMT1Q9H993 441 aa23.51■■□□□ 1.35
UBE2D3-215ENST00000503418 ADCY3O60266 1144 aa23.5■■□□□ 1.35
UBE2D3-215ENST00000503418 ADD2P35612 726 aa23.5■■□□□ 1.35
UBE2D3-215ENST00000503418 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
UBE2D3-215ENST00000503418 ABCB5Q2M3G0 1257 aa23.5■■□□□ 1.35
UBE2D3-215ENST00000503418 MBD4O95243 580 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 CCL5P13501 91 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 ELNP15502 786 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 SHMT1P34896 483 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 USP17L2Q6R6M4 530 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 CABP5Q9NP86 173 aa23.49■■□□□ 1.35
UBE2D3-215ENST00000503418 EVX2Q03828 476 aa23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 P2RX7Q99572 595 aaKnown RBP23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 RNF208Q9H0X6 261 aa23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 DCP1AQ9NPI6 582 aaPredicted RBP23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 EMILIN3Q9NT22 766 aa23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 BAZ2AQ9UIF9 1905 aaKnown RBP23.48■■□□□ 1.35
UBE2D3-215ENST00000503418 MYH8P13535 1937 aa23.47■■□□□ 1.35
UBE2D3-215ENST00000503418 HERVK_113P62684 666 aa23.47■■□□□ 1.35
UBE2D3-215ENST00000503418 IRF5Q13568 498 aa23.47■■□□□ 1.35
UBE2D3-215ENST00000503418 PRKAB2O43741 272 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 CHGBP05060 677 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 INHAP05111 366 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 CYP2D6P10635 497 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 GABPAQ06546 454 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 PXYLP1Q8TE99 480 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 DCTPP1Q9H773 170 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 ECHDC1Q9NTX5 307 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 MORF4L1Q9UBU8 362 aa23.46■■□□□ 1.35
UBE2D3-215ENST00000503418 MPHOSPH10O00566 681 aaKnown RBP23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 PEX10O60683 326 aa23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 NKX2-3Q8TAU0 364 aa23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 SHISA4Q96DD7 197 aa23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 GPATCH3Q96I76 525 aa23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 UNC93B1Q9H1C4 597 aa23.45■■□□□ 1.34
UBE2D3-215ENST00000503418 USP14P54578 494 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 UBE3CQ15386 1083 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 ZSCAN25Q6NSZ9 544 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 SLC44A5Q8NCS7 719 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 GPRC5AQ8NFJ5 357 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 ACER1Q8TDN7 264 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 C12orf42Q96LP6 360 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 PAGR1Q9BTK6 254 aa23.44■■□□□ 1.34
UBE2D3-215ENST00000503418 TXNRD2Q9NNW7 524 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms